Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0413 |
Symbol | |
ID | 4184247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 481095 |
End bp | 481790 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070421 |
Product | hypothetical protein |
Protein accession | YP_677043 |
Protein GI | 110636836 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.239427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA AATTAACTGT TAATGTATCT GATACGGAGC GTATTGCTTC GGTATTAGCC GGATCTTATT TTATGTACCG TTCTTTGAAA CGTCAGCCTA AAAACTATGC AGCAATCGCA TCTGCAGGCC TTTTATTATT CAGAGGTGTA ACAGGTCATT GTCCGGGTTA TTCGGCTGCA GGGAAGAAGA CGTTGCCCGC TCCGGTTCAC AATATAGATA TCGAAACATC GGTTATCGTT AACCGTCCGG TGGATACCGT TTATTCTTTC TGGAGGAGAT TGGAAAATCT ACCCTTGTTT ATGACACATT TAAAAAGTGT AAAGCAGAAA GATCATAATA AATCGGATTG GGAAGCTTAT TTGCCCGGCG GCATCGGAAG TATTCACTGG GAAGCGAAAA TTGTAAAAGA TAAACCAGGC AAAGTAATCG CGTGGAGCTC ACTTGAAAAT TCTACCATAC ATAATGCAGG CAAAGTTATG TTTGAAGATA TTGGTGAATT AGGTACCGTT ATAAATGTTG TAATCAGTTA TCAGGCACCA CTGGGTGTTG CAGGTGAAAA AGTATTGGCA TTACTTACGC CTACGTTTGA AAAAATGATC CGAAAAGATA TTGTTAATTT CAAACAGTAT ATTGAAACAG GCAAATTGCC AACAGATAAA GAATATGCAG AAAACGGCAA ATCACAATTT GAATAA
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Protein sequence | MEKKLTVNVS DTERIASVLA GSYFMYRSLK RQPKNYAAIA SAGLLLFRGV TGHCPGYSAA GKKTLPAPVH NIDIETSVIV NRPVDTVYSF WRRLENLPLF MTHLKSVKQK DHNKSDWEAY LPGGIGSIHW EAKIVKDKPG KVIAWSSLEN STIHNAGKVM FEDIGELGTV INVVISYQAP LGVAGEKVLA LLTPTFEKMI RKDIVNFKQY IETGKLPTDK EYAENGKSQF E
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