Gene CHU_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0413 
Symbol 
ID4184247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp481095 
End bp481790 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content39% 
IMG OID638070421 
Producthypothetical protein 
Protein accessionYP_677043 
Protein GI110636836 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.239427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AATTAACTGT TAATGTATCT GATACGGAGC GTATTGCTTC GGTATTAGCC 
GGATCTTATT TTATGTACCG TTCTTTGAAA CGTCAGCCTA AAAACTATGC AGCAATCGCA
TCTGCAGGCC TTTTATTATT CAGAGGTGTA ACAGGTCATT GTCCGGGTTA TTCGGCTGCA
GGGAAGAAGA CGTTGCCCGC TCCGGTTCAC AATATAGATA TCGAAACATC GGTTATCGTT
AACCGTCCGG TGGATACCGT TTATTCTTTC TGGAGGAGAT TGGAAAATCT ACCCTTGTTT
ATGACACATT TAAAAAGTGT AAAGCAGAAA GATCATAATA AATCGGATTG GGAAGCTTAT
TTGCCCGGCG GCATCGGAAG TATTCACTGG GAAGCGAAAA TTGTAAAAGA TAAACCAGGC
AAAGTAATCG CGTGGAGCTC ACTTGAAAAT TCTACCATAC ATAATGCAGG CAAAGTTATG
TTTGAAGATA TTGGTGAATT AGGTACCGTT ATAAATGTTG TAATCAGTTA TCAGGCACCA
CTGGGTGTTG CAGGTGAAAA AGTATTGGCA TTACTTACGC CTACGTTTGA AAAAATGATC
CGAAAAGATA TTGTTAATTT CAAACAGTAT ATTGAAACAG GCAAATTGCC AACAGATAAA
GAATATGCAG AAAACGGCAA ATCACAATTT GAATAA
 
Protein sequence
MEKKLTVNVS DTERIASVLA GSYFMYRSLK RQPKNYAAIA SAGLLLFRGV TGHCPGYSAA 
GKKTLPAPVH NIDIETSVIV NRPVDTVYSF WRRLENLPLF MTHLKSVKQK DHNKSDWEAY
LPGGIGSIHW EAKIVKDKPG KVIAWSSLEN STIHNAGKVM FEDIGELGTV INVVISYQAP
LGVAGEKVLA LLTPTFEKMI RKDIVNFKQY IETGKLPTDK EYAENGKSQF E