| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0409 |
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| Symbol | |
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| ID | 4184243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 476961 |
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| End bp | 479516 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638070417 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_677039 |
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| Protein GI | 110636832 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.613133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTC CTTTTATTTC ACGGATTATA CTCTTTCTAT TTATCAGTAT CAACCTGCTT
ACACATCAGC TACGTGCCCA GGATACTACA AGCTGCTTTA CACATTCGAT GAATGTATAC
AAAACAGGAA ATTATCCGGA TGCGTATAAA AATTTTTCTG CTTGTTTAAA AAATATAGAA
GATAAAAAAT CTGAAGCATA CACCAGCTGC ATTTTATATA TGGGTATATG TGCGTTGGAA
AATGCTGCAT ACAAAAATGC ATCCACTCTT TTACATCTTG CGGAACAGTC TTTTACTCCA
TCTTCAGAAT ATTATGCAAT CTGCCAGCAA AATTTAGCAG CCTTAAGTAA ACGACAGGGA
AAATATAATG AAGCTGAAGC TATCCTCATT AAGCTTCTTG AAATACAGGA AAATTCAGCG
AGTATCCCTT GCGCATCAAA AGCAATAACA CTAAATGATC TCGGTGTTAT CTACAAAAGA
CTTGGTCAAT ATGAGCGGTC CATTATGTAT TTTTCTGAAA GCCTCCGACT CAAACAATCC
TGTTTAGACC CCGAAGACCC TTCTATTACC ATTAGTCTGA ATAACCTGGC TGGGGTGTAC
ATGAAACAAA AAGACTACAT GCGGGCCGAC AGCTTATACA CCGCAGCTAT AAAAATTAAA
ATTAAACGAT ACGGACCAAA TCACCCGAGC ACGTTACTTG CCCGGAATAA TTTAGCCGAA
CTTTACAGGC AGCAAAATAA TTATGCAGCT GCACTAAATA TTCTCCAGGA CGTACGTGAG
CGGAAAGCTT CAAGTATTGG TAAGCGGACC TTGTCTTATG CCACAACGCT GCATACAATA
GCGAATGTTT ATTTTGCTTC CGGAAATTTT TCTGAAGCCT TAACCTATTG TAATGCATCT
ATTACGATTA AAGAAAAACT TCTTGGAAAA ACCGGCTTAA GTACGTTGCA TGGTTACCTG
CTGCTTGCAA AAATAAATCA TGCTACAGGT AAAAACCAGG AAGCAAGATC CATGTATGAT
TTTATTTTAA ACACAAAAAA AGAAGAAATT GATGCGTACT TTAAATATCT GGGAGAAGAA
GAAAAAATTC AATACGTAAA AGCCCACACA GCTTACTGGA AAGAGTTTAC AACCTTTGTA
TTTGATATGA TGCACGCGGA TTCTTCCAGC CATTCTGAAT CAAACAAAAT ATTATTCAAC
CAATGGATTG AGAACCGTTG GTATGTATCT GAACTTATAC TGGAAGAAAC ACAACGGCAG
CACAGGATTT GGGAAAACAT ACATGACAGC GCGCAGGCAA GTATGGTAGA GGAATTAAAA
GAATTAAAAG ACGCCATTGC AAAAATATAT TTATTAAAAT CGAAAGATGA TACAGAAACA
TCCGCAGAAT TAAATACACT AACGGATCGT GCTACCCGCA TTGAAAAAAA ACTCACGAGC
ATATCTTCCG TTGAAAAACG CAAATATCAT TCAGTAGCTG ACATTACTGC CGCATTGGAA
GCAACCGAAT GCATTGTCGA AATCATAAAA CCACTACAGC CAACGGGCAA CTATCTGGCA
TTAGTATACC TGAAAGAAGC TGATACACCT CATAAAATAT GGCTACCAGC AGCAAGTATG
TTAGATGGTA AAGCATATGC GTATTACAAA AATGCGATCC AGTTTAAAAT TCAGGATACA
AAAAATTTAG TCCTGTATTG GCAGCCGATT GAAAACTTTA TATCTCAACA TAGCGCTATC
CGAACCGTGT ATCTGGTACG TGACGGTATC TACGAATGTA TGAATATACA TACTCTTTTA
GCGGATGCGG ATAAAAAAAC AACTTCACTT ATTTACCTGA ATAAGACAGA GAATATTCTT
TCCTATAAAC AGCGTGCTTC GACTATTTTA TTACATACAT CTGTATTTAT TTATCATCCG
CTTTACGGTG CAACGGATAC AGATTGTGTC TATTCAGATT TGCCCGGAAC GAAAAAAGAA
GTTGATGCCA TTGAACCATT ATTCAGGAAA AAAGCTCTTG AAACAATTCG TTATAGCGAA
AAAACGGCAA CCGAAACAAC TATAAAAAAT GACACCGCTG TTTATTCTAT TATGCATATT
GCCACGCACG GATATTTAGA AATAACTCCG GAAGATGATT ACCTGGAATC CATGATTCAT
TCCGGATTAG TGCTCAGCGG GGTGTGTGAT ATTTCGTTCT TGGATGCTTC AATGAATGAT
GATGGCATAT TAACGTCGTA TGAAATTGCT CAGTTAAATT TAAGTGCTAC AGAACTGGTT
GTGTTGTCAG CGTGTCAAAG CGGTTTAGGT ACACTTGATA ACCAGGAAGG CATACTTGGC
TTGCAAAGAG GCTTGCTGGT AGCCGGAGCC AAAAAAGTAC TGGTTTCGCT TTGGAAAATT
GATGATGCCA TTACTGCCGA GTGGATGTAT CATTTTTACT CGGATTTACT TGAACACAAA
TCCTGTTCGG AAGCCTATCT GTTTGCTCAG CAACGAATAA AAGCACGTTA TCCTGAGCCG
TATTATTGGG GTGCTTTTGT CTTACTGGAA CAATAA
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| Protein sequence | MKSPFISRII LFLFISINLL THQLRAQDTT SCFTHSMNVY KTGNYPDAYK NFSACLKNIE
DKKSEAYTSC ILYMGICALE NAAYKNASTL LHLAEQSFTP SSEYYAICQQ NLAALSKRQG
KYNEAEAILI KLLEIQENSA SIPCASKAIT LNDLGVIYKR LGQYERSIMY FSESLRLKQS
CLDPEDPSIT ISLNNLAGVY MKQKDYMRAD SLYTAAIKIK IKRYGPNHPS TLLARNNLAE
LYRQQNNYAA ALNILQDVRE RKASSIGKRT LSYATTLHTI ANVYFASGNF SEALTYCNAS
ITIKEKLLGK TGLSTLHGYL LLAKINHATG KNQEARSMYD FILNTKKEEI DAYFKYLGEE
EKIQYVKAHT AYWKEFTTFV FDMMHADSSS HSESNKILFN QWIENRWYVS ELILEETQRQ
HRIWENIHDS AQASMVEELK ELKDAIAKIY LLKSKDDTET SAELNTLTDR ATRIEKKLTS
ISSVEKRKYH SVADITAALE ATECIVEIIK PLQPTGNYLA LVYLKEADTP HKIWLPAASM
LDGKAYAYYK NAIQFKIQDT KNLVLYWQPI ENFISQHSAI RTVYLVRDGI YECMNIHTLL
ADADKKTTSL IYLNKTENIL SYKQRASTIL LHTSVFIYHP LYGATDTDCV YSDLPGTKKE
VDAIEPLFRK KALETIRYSE KTATETTIKN DTAVYSIMHI ATHGYLEITP EDDYLESMIH
SGLVLSGVCD ISFLDASMND DGILTSYEIA QLNLSATELV VLSACQSGLG TLDNQEGILG
LQRGLLVAGA KKVLVSLWKI DDAITAEWMY HFYSDLLEHK SCSEAYLFAQ QRIKARYPEP
YYWGAFVLLE Q
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