| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0400 |
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| Symbol | otsA |
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| ID | 4184234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 469942 |
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| End bp | 472143 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638070408 |
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| Product | putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB |
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| Protein accession | YP_677030 |
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| Protein GI | 110636823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase
[COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.733308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.234564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACG AAAAAAGATT AATTATTGTA GCATATAGAA TACCTTTTAA AGTTACGTTT
AAAGAAAGCG GAGAGCGCGT ATTACAACAA AATTCAGGAG GGCTTGTTTC CGCTATCCTA
TCATTGGCAG AAAAAGGAGA TGTGTTTGGT AAAAATCAAA AAATTCATTG GTTTGGTTAT
TCCACACCAG ATATTTTACA GGAGGGAGAA ACGCAGGTTG AAAATGAAAA TTTTATTGTA
CATCCTGTCT TAATTGAAGA TGCACTAAAT GATGCGTATT ACGAAGGATT TTGTAACAGT
ACGATTTGGC CCATTTCGCA TTATTATCCC TATCTCACCA GCTTTAATGA AGAGGATTAT
GAAGCGTATG TAAAAGCAAA TAAAATATTT GCAGATCAGA TTAATGCCTT TATCCGTCCG
GGAGATATGG TCTGGATACA GGATTATCAG CTGATGTTAT TGCCTGGCAT GCTCCGTTCA
GAAAATCCGG ATGCTTCTAT CGGTTATTTC CATCACATCC CTTTTGCAAC GTTTGAAATT
TTTCGTTTGC TTCCGAAACA ATGGCAAACA GAATTGTTAA AAGGTATGAT CGGCGCAGAT
CTGGTTGGTT TTCATACCAA TGATTACAGC CAGTATTTTT TGAGAAGTGT GCAGCGTGTA
TTAGGCTATG ATACTACTGC CCGCGACATA AGTATTCCAA ACAGGATCGT GCGGGTAGAC
ACATTTCCCA TCAGCATTGA TTATAATAAA TTTCAGGAAT TGTATAATGA TCCGGGCGTA
ATTGAAAAAA GGAAAGAGTT TTTAAAAGAC CTCAGTGCAG AGAAAAATAT TTTTTCCGTT
GACCGGCTAG ATTATTCAAA AGGATTGATC CATCGGTTAA ATGGGTTTGA ATATTTTCTG
GATCAGTATC CGCAATGGCA TACACGTGTT GTACTTACAA TGATTGTAGT TCCTTCGCGT
GAAACAATCC TGAAGTATGC TGAGATGAAA CACGAACTGG AAGAAGCGGT AGGCCGCATT
AACGGTAAGT ACGGTACCTT AGGCTGGCGT CCGGTTATAT ATCTGTACCG TTCGTTAAGC
TTTGAAGAAT TAGGCGCGTT ATATACACTG GCCGATGTGG CACTCATCAC GCCCATCCGT
GACGGGATGA ATTTAGTTGC AAAAGAATTT GTTGCTACGC GTACCGATAA AAAAGGCGTA
TTGATTTTAA GTGAAATGGC AGGTGCGTCG CTGGAATTGA ATGGTGCAAT ACTGATCAAC
CCAACAGACA AGAGGACACT GGCCGCAGCC ATTATTCAGG CATTAACCAT GGACGAGCAG
GAGCAGACAC AACGTATGCA GATGATGCAG GACCGGATCC GTGTGTATGA TATATTTAAA
TGGACAGAAG ACTACATGGA TCAATTAGAT ATTATAAAAT TGAAACAAAT GGAATTCGAA
GAGAAAATTA TAAACCAGGA TGTGTTAAAA AGTTTCAAAC AGATTTTTGA TGAATCAAGC
CGGCGCTTGT TTTTATTGGA TTATGACGGA ACCTTATCTC CCATTGTTCC TGACCCCTCC
AGTTCTAAGC CAAGTGTAGG TATTGTTGAT GTATTAAAAA AACTCAGCAG TGATTTTAAT
GTAAATGTTG CTATCATAAG CGGAAGAGAT AAAGAGTTTT TGAATTATAT CTTTGATCCA
AATACAATTC TGTCTGCAGA GCATGGCGCG TTCTTACGTA TTCCGGGTCA GGATTGGGAG
CTGCAATATG ATTACAATGA TCAGTGGAAG CGTTCTGTAT TGCCGGTGTT TCAGAAGTAT
ACCGATCGTT GCGCCGGATC TTTTATTGAA AATAAATCAA CATCACTTGC CTGGCATTAC
AGAAATACAG AAAAAGAATA TGCTCATATC CGTTCCAGAG AATTTATTGA AGAACTGGAA
AACAAAGTTG GGATAAAATC AAATCTCGCC ATTATTGATG GTGATAAAGT AATTGAAATG
AAACCTTCTG ATGTAGATAA GGGGATTGCT GCGCGGAAAA TATGTGATCT GTATCAGCCG
GATTTTATTT TATCTATTGG AGATGACCGG ACTGATGAAG ACATGTTTAA AGCGCTTCCG
GATAATGCGC TTACAATTAA AGTTGGCGTT AAAAATAGTT CTGCCAAGTT TACAATTAAA
ACGCAGGAAG AAGTAATGAC CATTCTGAAT ACGTTTTTAT AA
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| Protein sequence | MNDEKRLIIV AYRIPFKVTF KESGERVLQQ NSGGLVSAIL SLAEKGDVFG KNQKIHWFGY
STPDILQEGE TQVENENFIV HPVLIEDALN DAYYEGFCNS TIWPISHYYP YLTSFNEEDY
EAYVKANKIF ADQINAFIRP GDMVWIQDYQ LMLLPGMLRS ENPDASIGYF HHIPFATFEI
FRLLPKQWQT ELLKGMIGAD LVGFHTNDYS QYFLRSVQRV LGYDTTARDI SIPNRIVRVD
TFPISIDYNK FQELYNDPGV IEKRKEFLKD LSAEKNIFSV DRLDYSKGLI HRLNGFEYFL
DQYPQWHTRV VLTMIVVPSR ETILKYAEMK HELEEAVGRI NGKYGTLGWR PVIYLYRSLS
FEELGALYTL ADVALITPIR DGMNLVAKEF VATRTDKKGV LILSEMAGAS LELNGAILIN
PTDKRTLAAA IIQALTMDEQ EQTQRMQMMQ DRIRVYDIFK WTEDYMDQLD IIKLKQMEFE
EKIINQDVLK SFKQIFDESS RRLFLLDYDG TLSPIVPDPS SSKPSVGIVD VLKKLSSDFN
VNVAIISGRD KEFLNYIFDP NTILSAEHGA FLRIPGQDWE LQYDYNDQWK RSVLPVFQKY
TDRCAGSFIE NKSTSLAWHY RNTEKEYAHI RSREFIEELE NKVGIKSNLA IIDGDKVIEM
KPSDVDKGIA ARKICDLYQP DFILSIGDDR TDEDMFKALP DNALTIKVGV KNSSAKFTIK
TQEEVMTILN TFL
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