Gene CHU_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0388 
Symbol 
ID4183449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp458477 
End bp459523 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content42% 
IMG OID638070396 
Producthypothetical protein 
Protein accessionYP_677018 
Protein GI110636811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.112765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.594052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAACT TAAAAACATT TCCGTACATG CCTAATACCT TCGAACATTT ACAGGCTGCG 
CACTGCGAAA ATGGTGTAAC AACAAATCTA TTGCGCAATG TCGGCGTTTC AAAAATGACC
GAACCGCTTG CCTTTGGTAT TGGCTCCGGA TTATTTTTTA TTTACATCCC TTTAATGAAA
ATTAACGGCG GACCAGCTAT TGCATATCGC ACCATGCCTG GTTTAATTTT TAAACGAACA
GCACAATCAT TAGGCATTGA TGTTGTACGT AAAACATTCC GTTCAACTAT AAAAGCACAG
GAGTTTCTCG ATGCATGCAT CAAAGCCGGT CAGCCGGTAG GCTGCCAGGT TGGGGTATAC
TTTCTGAGTT ACTTCCCGAA AGAATATCGC TTTCATTTTA ATGCACATAA TTTAATTGTG
TACGGAAAAG AAGGCGACAA TTACCTGGTG AGTGATCCGG TAATGGAAAC GACAAATATA
TTAAGCACCT ACGAGCTGGA ACGTGTACGG TTTGCAAAAG GTGCATTGGC CCCGAAAGGT
CAGATCTATT TCCCAAAACC AAATCATGAA CCTGTTTCTG ATGATAAGAT CCGGAAGGCA
ATCGTTACCG GCGTTAAAAG AAACATTCGT GACATGCTGC ATATCCCGGG TCCTATTGCA
GGCGTAAGTG GTATCAAATA CACCGGAAAT AAAATAAAAA ACTGGCGCGA TAAATTAGGC
ATTGAAAAAG CAGGTTTATA CCTGGCTCAA CTGGTGCGTA TGCAGGAAGA AATCGGTACG
GGCGGTGGCG GATTCCGCTT CATCTATGGG GCATTTCTTC AGCAGGCACA TGCCTTTCAT
AACGACGACC AATTGCTTGA AATCTCTAAA TCATTTACAC AGTCGGGAGA TTTATGGAGA
AGTGCTGCGA TTCAGGCAGC AGGTATTTAT AAAGGCCGTA TTACTTCTCA GGCAGATTTT
AATGTGATGG GCGATTACCT GCTTGAAATT TCTGAGCTGG AAAAAAAGGC ATTTAAAGAA
TTAACTAAAA TCAAATGGCA GAAATAA
 
Protein sequence
MINLKTFPYM PNTFEHLQAA HCENGVTTNL LRNVGVSKMT EPLAFGIGSG LFFIYIPLMK 
INGGPAIAYR TMPGLIFKRT AQSLGIDVVR KTFRSTIKAQ EFLDACIKAG QPVGCQVGVY
FLSYFPKEYR FHFNAHNLIV YGKEGDNYLV SDPVMETTNI LSTYELERVR FAKGALAPKG
QIYFPKPNHE PVSDDKIRKA IVTGVKRNIR DMLHIPGPIA GVSGIKYTGN KIKNWRDKLG
IEKAGLYLAQ LVRMQEEIGT GGGGFRFIYG AFLQQAHAFH NDDQLLEISK SFTQSGDLWR
SAAIQAAGIY KGRITSQADF NVMGDYLLEI SELEKKAFKE LTKIKWQK