Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0388 |
Symbol | |
ID | 4183449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 458477 |
End bp | 459523 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070396 |
Product | hypothetical protein |
Protein accession | YP_677018 |
Protein GI | 110636811 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.112765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.594052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATCAACT TAAAAACATT TCCGTACATG CCTAATACCT TCGAACATTT ACAGGCTGCG CACTGCGAAA ATGGTGTAAC AACAAATCTA TTGCGCAATG TCGGCGTTTC AAAAATGACC GAACCGCTTG CCTTTGGTAT TGGCTCCGGA TTATTTTTTA TTTACATCCC TTTAATGAAA ATTAACGGCG GACCAGCTAT TGCATATCGC ACCATGCCTG GTTTAATTTT TAAACGAACA GCACAATCAT TAGGCATTGA TGTTGTACGT AAAACATTCC GTTCAACTAT AAAAGCACAG GAGTTTCTCG ATGCATGCAT CAAAGCCGGT CAGCCGGTAG GCTGCCAGGT TGGGGTATAC TTTCTGAGTT ACTTCCCGAA AGAATATCGC TTTCATTTTA ATGCACATAA TTTAATTGTG TACGGAAAAG AAGGCGACAA TTACCTGGTG AGTGATCCGG TAATGGAAAC GACAAATATA TTAAGCACCT ACGAGCTGGA ACGTGTACGG TTTGCAAAAG GTGCATTGGC CCCGAAAGGT CAGATCTATT TCCCAAAACC AAATCATGAA CCTGTTTCTG ATGATAAGAT CCGGAAGGCA ATCGTTACCG GCGTTAAAAG AAACATTCGT GACATGCTGC ATATCCCGGG TCCTATTGCA GGCGTAAGTG GTATCAAATA CACCGGAAAT AAAATAAAAA ACTGGCGCGA TAAATTAGGC ATTGAAAAAG CAGGTTTATA CCTGGCTCAA CTGGTGCGTA TGCAGGAAGA AATCGGTACG GGCGGTGGCG GATTCCGCTT CATCTATGGG GCATTTCTTC AGCAGGCACA TGCCTTTCAT AACGACGACC AATTGCTTGA AATCTCTAAA TCATTTACAC AGTCGGGAGA TTTATGGAGA AGTGCTGCGA TTCAGGCAGC AGGTATTTAT AAAGGCCGTA TTACTTCTCA GGCAGATTTT AATGTGATGG GCGATTACCT GCTTGAAATT TCTGAGCTGG AAAAAAAGGC ATTTAAAGAA TTAACTAAAA TCAAATGGCA GAAATAA
|
Protein sequence | MINLKTFPYM PNTFEHLQAA HCENGVTTNL LRNVGVSKMT EPLAFGIGSG LFFIYIPLMK INGGPAIAYR TMPGLIFKRT AQSLGIDVVR KTFRSTIKAQ EFLDACIKAG QPVGCQVGVY FLSYFPKEYR FHFNAHNLIV YGKEGDNYLV SDPVMETTNI LSTYELERVR FAKGALAPKG QIYFPKPNHE PVSDDKIRKA IVTGVKRNIR DMLHIPGPIA GVSGIKYTGN KIKNWRDKLG IEKAGLYLAQ LVRMQEEIGT GGGGFRFIYG AFLQQAHAFH NDDQLLEISK SFTQSGDLWR SAAIQAAGIY KGRITSQADF NVMGDYLLEI SELEKKAFKE LTKIKWQK
|
| |