Gene CHU_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0382 
Symbol 
ID4183443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp453403 
End bp453945 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content36% 
IMG OID638070390 
Producthypothetical protein 
Protein accessionYP_677012 
Protein GI110636805 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0621265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TAACCAAAAT TTCAGGAAGT TTACTGTTAT CCGTATTTGT ACTGGCAAGC 
ATGTCGTTTT TATTAAAGCC GGATTATTCA AAAAGTGCTG TAGAATTTAA AATTAAAAAT
GCAGGCATTG GAGTAGACGG GAGTTTCAAA ACGTTTGAAA CAAGTATTGA TTATAATGAA
GCTGCTGCAG CTCCAAGCTC CATAAAAGCA ACCATTACGG TAGAATCCAT CAATACAGGT
ATTGAAGCAA GAGATAAACA TTTAAGAAAG GATGATTTTT TTGATGCGGA AAAATATCCG
AAAATAACAT TTGAAAGCAC AAAAATATTT AAAGTAACAA ATGGATTTAC AGCAGAAGGT
AAGCTTACAA TCAAAGGAGT GACAAAAGAT ATTACAATTC CGTTTACATA TGCAGGAAAT
GCTCAGGGAG GAGTTTTTGA AGGTGCTGTT ACATTGAATC GCCTGGATTA TGGCGTTGGC
GGCAAGAGCA TGACTATGGG AGACGACGTT GACGTGAAAT TAAAAGTAAC AGCAGCAAAA
TAA
 
Protein sequence
MKTITKISGS LLLSVFVLAS MSFLLKPDYS KSAVEFKIKN AGIGVDGSFK TFETSIDYNE 
AAAAPSSIKA TITVESINTG IEARDKHLRK DDFFDAEKYP KITFESTKIF KVTNGFTAEG
KLTIKGVTKD ITIPFTYAGN AQGGVFEGAV TLNRLDYGVG GKSMTMGDDV DVKLKVTAAK