Gene CHU_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0369 
SymbolaroC 
ID4186061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp442078 
End bp443160 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content44% 
IMG OID638070377 
Productchorismate synthase 
Protein accessionYP_676999 
Protein GI110636792 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA CATACGGCAC AATATTTCGC ATTACAACCT TTGGAGAATC ACATGGTAAT 
GCTGTTGGAG TTATAGTGGA TGGTTGTCCG CCTAATATCG AAATCGACGA AGCGTTTATT
CAATCTGAAA TGGCCCGCAG AAAACCCGGT CAGTCCAAGA TCGTTACACA GCGTCAGGAA
GACGATGAGA TAGAAATTTT ATCCGGTGTA TTTGAAGGAA AATCTACCGG TACGCCTATT
GCTATGATGG TGCGTAACGC CGATCAGCGC AGTAAAGATT ATTCACACAT TGCAGATCGT
TTCCGCCCGT CTCATGCAGA TTACACCTAT CAGGAAAAAT ATGGCTTCCG TGATTACCGC
GGCGGCGGCA GAAGTTCTGC CCGGGAAACG CTGGCACGCG TAGCTGCTGG CGCACTGGCT
AAAATGATTC TGGCTAAAGT AAATATTAAG ATTCAGGCAT ATGTTTCACA GGTTGGTCCG
TTGAAACTTA CGACCGATTA TAAAGCACTG AATATTCCGA ACGCGGAAAC CAATATCATC
CGTTGTCCGG ATGATGCTGT AGCAGCAAAA ATGATTGAAT TTATTGATGA AACACGTAAA
AATAAAGATA CCATTGGTGG TGTTGTAAGC TGCGTAATTG AAGGTGTTCC GGTTGGTTTA
GGCGAACCGG TATTTGATAA ACTGCATGCA GAACTTGGCA AAGCCATGTT AAGCATCAAT
GCCGTAAAAG GGTTTGAATA CGGAAGCGGG TTTGAAGGTG TAGAACAGTT CGGGTCACAG
CACAACGATA AATTTTATGC GGATGAACAG GGCAATGTAC GTACACAAAC CAACAATTCA
GGCGGTATTC AGGGCGGTAT CAGCAACGGA GAAGATATTT ATTTCCGCGT GGCATTTAAA
CCTGTAGCTA CAATTATGAT TGACCAGGAA AGCATCAACG ACAAAGGTGA AACGGTTACT
GTAAGCGGTA AAGGCCGCCA TGACCCATGC GTGGTTCCCA GAGCCGTACC GATTGTTGAA
GCAATGGCGG CAATTGTTAT GGTGGATTTC TACTTAAGAA ATAAAGCAAT ACGTCTTGAC
TGA
 
Protein sequence
MSNTYGTIFR ITTFGESHGN AVGVIVDGCP PNIEIDEAFI QSEMARRKPG QSKIVTQRQE 
DDEIEILSGV FEGKSTGTPI AMMVRNADQR SKDYSHIADR FRPSHADYTY QEKYGFRDYR
GGGRSSARET LARVAAGALA KMILAKVNIK IQAYVSQVGP LKLTTDYKAL NIPNAETNII
RCPDDAVAAK MIEFIDETRK NKDTIGGVVS CVIEGVPVGL GEPVFDKLHA ELGKAMLSIN
AVKGFEYGSG FEGVEQFGSQ HNDKFYADEQ GNVRTQTNNS GGIQGGISNG EDIYFRVAFK
PVATIMIDQE SINDKGETVT VSGKGRHDPC VVPRAVPIVE AMAAIVMVDF YLRNKAIRLD