Gene CHU_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0367 
Symbol 
ID4186059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp439397 
End bp440635 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content42% 
IMG OID638070375 
Productpermease 
Protein accessionYP_676997 
Protein GI110636790 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.32941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG AACAAGAAGT AGCAGAGCGG CAGGTTAGTC AAACCATCCA GACAACGGTA 
TACCCGATTC TCTTTGCAAT CAGTGGCGCA CATTTATTGA ATGATCTTAT ACAGCAGTCA
ATACCATTGA TGTATCCGGT CTTTAAGCAA TCACTTAATC TTAGCTTTAC AGAAATCGGG
TTGATTACAT TTGTGTTAAA CTTCACCGCA TCGTTGCTTC AGCCTGCCAT TGGCTTGTAT
ACAGATGTGA AACCAAAACC CTATTCGCTG CCGATTGGCA TGTGTTTTAC CTTGGTGGGT
ATTATCTTTT TGTCTGTTGC TACAAACTTC TATCTGATTC TTGCATCTGT ATGTGTGGTG
GGTATCGGTT CTGCTATTCT TCACCCGGAA TCTTCCCGTG TGGCATACAT GGCATCCGGC
GGCTCAAAGA AAAGAGGATT GGCGCAATCC ATCTTTCAGA TCGGCGGGAA CACCGGGAGT
GCGATAGCAC CACTGGTAGT TGCGTGGCTC ATAGCACCGA AAGGGCAGCA GGGTATTATT
TATTTAACGG CCTTTGCTCT GTTTGCAATT ATCATTCAAT CACGTGTATC TGTATGGTAT
AAAAATTATT TATCCAGCAG AAGTAAAAAG ACGACATCAA TAGGCGACAC ACATAACCTG
TCCAGAAACA AAGTGATCAG CGCGTTAACC ATTCTGGTAG TGTTAATATT CTCTAAGTTT
GTGTATGTAT CAAGCATTAC AAGTTATTAT ACCTTTTATC TGGACAAAAC ATTTGGATTA
ACGGTAGAGC AATCTCAATT CTATTTGTTC ATGTTTCTTG TATCGATGGC TATTGGGACG
TTCCTCGGCG GGCCGTTAAG CGACCGGTTC AATAGAAAAC ACGTGATCTG GTTTTCTATT
TTAGGTACAG CTCCGTTTGC GTTATTATTA CCCTATGCAA ATTTATTCTG GTCGGGAATA
TTATGTGTAA TGATTGGCTT AATCCTGTCA TCTGCGTTCT CAGTAATACT GGTATATGCA
CAGGAACTGA TGCCGGGGAA AATCGGCATG GTATCAGGCC TGTTCTTCGG ACTTGCTTTT
GGCATGGGCG GAATCGGTTC CGCTATTTTA GGATACGTTG CCGATCAAAC GTCGATTGAT
GTTGCATTCC GGATTGCTTC TGTATTGCCT TTACTTGGGC TGGTTGCAGG TTTTTTACCG
AATCTTAAAA AGGAGATAGA AGCAGTAAAA TCAATGTAA
 
Protein sequence
MENEQEVAER QVSQTIQTTV YPILFAISGA HLLNDLIQQS IPLMYPVFKQ SLNLSFTEIG 
LITFVLNFTA SLLQPAIGLY TDVKPKPYSL PIGMCFTLVG IIFLSVATNF YLILASVCVV
GIGSAILHPE SSRVAYMASG GSKKRGLAQS IFQIGGNTGS AIAPLVVAWL IAPKGQQGII
YLTAFALFAI IIQSRVSVWY KNYLSSRSKK TTSIGDTHNL SRNKVISALT ILVVLIFSKF
VYVSSITSYY TFYLDKTFGL TVEQSQFYLF MFLVSMAIGT FLGGPLSDRF NRKHVIWFSI
LGTAPFALLL PYANLFWSGI LCVMIGLILS SAFSVILVYA QELMPGKIGM VSGLFFGLAF
GMGGIGSAIL GYVADQTSID VAFRIASVLP LLGLVAGFLP NLKKEIEAVK SM