Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0367 |
Symbol | |
ID | 4186059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 439397 |
End bp | 440635 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070375 |
Product | permease |
Protein accession | YP_676997 |
Protein GI | 110636790 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.32941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATG AACAAGAAGT AGCAGAGCGG CAGGTTAGTC AAACCATCCA GACAACGGTA TACCCGATTC TCTTTGCAAT CAGTGGCGCA CATTTATTGA ATGATCTTAT ACAGCAGTCA ATACCATTGA TGTATCCGGT CTTTAAGCAA TCACTTAATC TTAGCTTTAC AGAAATCGGG TTGATTACAT TTGTGTTAAA CTTCACCGCA TCGTTGCTTC AGCCTGCCAT TGGCTTGTAT ACAGATGTGA AACCAAAACC CTATTCGCTG CCGATTGGCA TGTGTTTTAC CTTGGTGGGT ATTATCTTTT TGTCTGTTGC TACAAACTTC TATCTGATTC TTGCATCTGT ATGTGTGGTG GGTATCGGTT CTGCTATTCT TCACCCGGAA TCTTCCCGTG TGGCATACAT GGCATCCGGC GGCTCAAAGA AAAGAGGATT GGCGCAATCC ATCTTTCAGA TCGGCGGGAA CACCGGGAGT GCGATAGCAC CACTGGTAGT TGCGTGGCTC ATAGCACCGA AAGGGCAGCA GGGTATTATT TATTTAACGG CCTTTGCTCT GTTTGCAATT ATCATTCAAT CACGTGTATC TGTATGGTAT AAAAATTATT TATCCAGCAG AAGTAAAAAG ACGACATCAA TAGGCGACAC ACATAACCTG TCCAGAAACA AAGTGATCAG CGCGTTAACC ATTCTGGTAG TGTTAATATT CTCTAAGTTT GTGTATGTAT CAAGCATTAC AAGTTATTAT ACCTTTTATC TGGACAAAAC ATTTGGATTA ACGGTAGAGC AATCTCAATT CTATTTGTTC ATGTTTCTTG TATCGATGGC TATTGGGACG TTCCTCGGCG GGCCGTTAAG CGACCGGTTC AATAGAAAAC ACGTGATCTG GTTTTCTATT TTAGGTACAG CTCCGTTTGC GTTATTATTA CCCTATGCAA ATTTATTCTG GTCGGGAATA TTATGTGTAA TGATTGGCTT AATCCTGTCA TCTGCGTTCT CAGTAATACT GGTATATGCA CAGGAACTGA TGCCGGGGAA AATCGGCATG GTATCAGGCC TGTTCTTCGG ACTTGCTTTT GGCATGGGCG GAATCGGTTC CGCTATTTTA GGATACGTTG CCGATCAAAC GTCGATTGAT GTTGCATTCC GGATTGCTTC TGTATTGCCT TTACTTGGGC TGGTTGCAGG TTTTTTACCG AATCTTAAAA AGGAGATAGA AGCAGTAAAA TCAATGTAA
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Protein sequence | MENEQEVAER QVSQTIQTTV YPILFAISGA HLLNDLIQQS IPLMYPVFKQ SLNLSFTEIG LITFVLNFTA SLLQPAIGLY TDVKPKPYSL PIGMCFTLVG IIFLSVATNF YLILASVCVV GIGSAILHPE SSRVAYMASG GSKKRGLAQS IFQIGGNTGS AIAPLVVAWL IAPKGQQGII YLTAFALFAI IIQSRVSVWY KNYLSSRSKK TTSIGDTHNL SRNKVISALT ILVVLIFSKF VYVSSITSYY TFYLDKTFGL TVEQSQFYLF MFLVSMAIGT FLGGPLSDRF NRKHVIWFSI LGTAPFALLL PYANLFWSGI LCVMIGLILS SAFSVILVYA QELMPGKIGM VSGLFFGLAF GMGGIGSAIL GYVADQTSID VAFRIASVLP LLGLVAGFLP NLKKEIEAVK SM
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