| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0357 |
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| Symbol | psd |
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| ID | 4186049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 426943 |
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| End bp | 427605 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638070365 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_676987 |
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| Protein GI | 110636780 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.954931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATAC ACAAAGAAGG ATATAGATCT TTATTTTACG TTTCAGCTTT TTTATTCCTT
TTGAATTTTC TTATCTATTA TTTTTTCCCT GAAGCCTCTA TTCTTCAAAA AACGGTTTTG
GTGATTTCAC TTTTAATTTT CCTGGTTGTA TTGCAATTCT TCCGCAATCC AAGCAGAACA
ATTGAGATCA ACGACAATCA GATCATTGCA CCGGCCGATG GAAAAGTAGT CGTAATTGAA
GAAGTAATTG AAACGGAATA TTTCAATGAA AAAAGAAGAC AGATTTCAAT TTTCATGTCG
CCATTCAACG TGCACAGCAA TAGAAATGCG GTATCTGGAA TTGTAAAATT CTTTAAATAT
CACCCTGGAA AGTTTTTAGT TGCATGGCAC CCGAAATCAA GTACAGAAAA TGAACGTACC
ACAACGGTTG TTCAGACAAA AAACAACGAA CAGATTTTAA TGCGCCAGAT TGCAGGAGCA
TTGGCCCGCA GAATTGTTTG GTACATTGAC GAAAATTCAA AGGTTACACA AGGCGAAGAA
TTCGGTTTCA TAAAATTCGG TTCACGTGTA GATCTATTCA TTCCGCTTGA TGCAAAAGTA
AAAGTATCGC TAAATCAAAC AACGGTTGGA GGTAAAACTG TAATAGCTGA ATTTTATTCA
TAA
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| Protein sequence | MTIHKEGYRS LFYVSAFLFL LNFLIYYFFP EASILQKTVL VISLLIFLVV LQFFRNPSRT
IEINDNQIIA PADGKVVVIE EVIETEYFNE KRRQISIFMS PFNVHSNRNA VSGIVKFFKY
HPGKFLVAWH PKSSTENERT TTVVQTKNNE QILMRQIAGA LARRIVWYID ENSKVTQGEE
FGFIKFGSRV DLFIPLDAKV KVSLNQTTVG GKTVIAEFYS
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