| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0346 |
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| Symbol | rpoE |
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| ID | 4186213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 415879 |
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| End bp | 416250 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070354 |
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| Product | RNA polymerase, sigma-E factor; heat shock and oxidative stress |
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| Protein accession | YP_676976 |
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| Protein GI | 110636769 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.213852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGGTTT GGGATAAAAT CAATGATTAC GATGCAGCCA AGGGGAGGTT GTTTACGTGG
ATGTTGAATA TTGCCCGTAA TCTTGCGTTA GATAAGCTTC GTTCAAAAGA ATATAAAGCA
AAGATGAAAA CCGATGATGT ATCGGAGAAC GTATTTATAT CAGATGAACG TTATGCAAGT
GCAAATAAGC CTGAATTTAT CGGCATTAAA GAAATGGTTG AAAAACTTCC TGCTGAACAG
AAAAAGTTAA TCGACCTGAT GTATTTTCAG GGATATTCCC AATCGGAAAT TTCTGAAGAA
TTACAAATGC CGCTGGGTAC AGTAAAAACG CGCGTACGTG CAGCCATGAT CTCATTAAGA
CAATTATTCT AA
|
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| Protein sequence | MKVWDKINDY DAAKGRLFTW MLNIARNLAL DKLRSKEYKA KMKTDDVSEN VFISDERYAS
ANKPEFIGIK EMVEKLPAEQ KKLIDLMYFQ GYSQSEISEE LQMPLGTVKT RVRAAMISLR
QLF
|
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