Gene CHU_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0345 
Symbol 
ID4186212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp413427 
End bp415496 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content36% 
IMG OID638070353 
Producthypothetical protein 
Protein accessionYP_676975 
Protein GI110636768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.293948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TATCAATCAT TATATCATTC TTTATCGTTA GCGCTAATCT TTTCGCCCAG 
CACGAAACCG ATGAGCGTAT ATTAGGCTTT AAATACAAAT TGAAATTTAC TAATAATACA
CCACTGATTG TTACAGAAAA TTCAAATTTG TATGATCCAT ATAATCCAAA CTATAGAGGA
AATTTACAAA CACCATATGC AAATTCTATT TGTGATACAT TAGGTAATGT GCTTTTTTAT
TATGACGGTG CCAATATTTA TGAACCAAAT GGGCAGGTAA TGAGAAATGG GACATTACAC
CAATATAATT TCAGTTCACT GTATGCAACA AGCCTGATTG TTCCGATTGA AGAAAGTAAT
CGTAGATACT ATTATCTGTT TGAAACATTG CCACATGAAG AAATGTGGGA TTATGTTACC
AATAGGCCAA TTAATGATAT AACAAGTTGC TATTATCCAA ATAAATGTTT TAAATTTTGG
GATTTGTGTA AACTGGAATA TCATATCATT GATATGCATG GGAATGGGGG TAGGGGTAAC
GTAATAAGTA AGAATATTTT TCTGAAAGAC TCGGTAGCCC CTTCCATCAG TGGAATTAAA
CATCAAAATA ATATTGATAC CTGGGTTTCT GTATTGGGAT ACCGCAGCAA TAACATTTTA
AACTACAGCG TGAATTCTTG CGAAATTAAA GCACCTGTAG TAAATACCAT TCCGGATTTT
GAATACAAAG AAAACCCTTT GTATATTCCG TACTCTCCTT CAGCATATAC GGGTTATCAG
CTTGTATATG CTACGAAAGG AGATTTTGGT GCATTTCCCG GCAATAAAAT TTCGGATAAT
CCAGACCCTT CTTTTATTCC ATATTATTTG TTTGTTGCTC CCTTTGATAA CCAGACAGGA
AAGTTCAATT TCAGTTTGAT GCAGACAATA AATGTGCGCA GCGGGGTACA TGCGCATTTG
TTTTCGCATG ATTCAAAATA TTTATATTGT AATGATAGTC ATTTATTGTC GTTTGTATGG
ATATACCAAT ATGAACTTAG TACGGGCATA TCTACGCCTC TATATTATAG TAATATCCCT
TTTGATAATA GCTTATCTGG CACTGATTAC GGCAAAGACA ATAACATCCT TATTTATAAA
TATAAAGCAC GGATACAAAG TGGAAGAGCT AAATATGTAA GCTATTTGGG TGAAATCCTC
CATATTGATC AGCCTTTCTT GCCGGGCAAC TTAATAGATT CATTACCAAT TCCTGCAGCA
GAACAACCGG ATTATAAACC TCAATACACG TACATTGCCC GCAATAACTA CATCTACAAT
TTCTATCACC CCGATTATAA AAAGCCGGAT GCTTTTCCTG TTGCACATTC CGTTTCAAAT
ACAATCACAT CACCTGCGTG TTTTAATCAA GCCGTTACAT TAAAAGGAAA TACAAACATT
CCGGCAGACA GCATGTATTG GCTTATTAAA AAAACATCAG ATACTAACTG GCAGCGTGTT
AATTCAGATA CATTTGACAT AACGCTTAGT CCCGGTACAT ACACCGCCAG TCTGGTTTCG
TACAAATACT GTTTGCCGGA CAGCGCTACG CAGCAATTTA CCATTGAGGA TTATCCAGCG
GTACGTTTAG CAGACGATAC GCTGTACACC TGCGAATCAA AGCCTGTTGA ACTTCCTTCC
ACTGATACCT ACAGCTATTA TTGGTACAAC GAAAATGGAG AAACCGTTTC CAATCAGATT
TCTGCAACTG GTAAATACAA CATAGTTGTA CAGAACAGTT GCGGTACAGG TAAGGATAGT
TTGTATCTTA AAAACAGCCT ACTTGAAATG ACTAATTTAA TTACGGCAAA TAATGACAAC
CTGAATGATT GTATGATTGC CACCTCAAAC AATAAGCATG AAACCATACA GCTTAGCATT
TATAATTCCT GGGGCAGCTG TGTTTTCTCT GAAAATAACT ATCATAACAA CTGGTGCCCC
GGTAATGAAT TAAGTAATGG CGTTTATTAT TACGAAGCCA GGTACAACAA CGCTTGCAGT
AAAAAAGGCT GGATAGAAAT TGTACGCTGA
 
Protein sequence
MKIISIIISF FIVSANLFAQ HETDERILGF KYKLKFTNNT PLIVTENSNL YDPYNPNYRG 
NLQTPYANSI CDTLGNVLFY YDGANIYEPN GQVMRNGTLH QYNFSSLYAT SLIVPIEESN
RRYYYLFETL PHEEMWDYVT NRPINDITSC YYPNKCFKFW DLCKLEYHII DMHGNGGRGN
VISKNIFLKD SVAPSISGIK HQNNIDTWVS VLGYRSNNIL NYSVNSCEIK APVVNTIPDF
EYKENPLYIP YSPSAYTGYQ LVYATKGDFG AFPGNKISDN PDPSFIPYYL FVAPFDNQTG
KFNFSLMQTI NVRSGVHAHL FSHDSKYLYC NDSHLLSFVW IYQYELSTGI STPLYYSNIP
FDNSLSGTDY GKDNNILIYK YKARIQSGRA KYVSYLGEIL HIDQPFLPGN LIDSLPIPAA
EQPDYKPQYT YIARNNYIYN FYHPDYKKPD AFPVAHSVSN TITSPACFNQ AVTLKGNTNI
PADSMYWLIK KTSDTNWQRV NSDTFDITLS PGTYTASLVS YKYCLPDSAT QQFTIEDYPA
VRLADDTLYT CESKPVELPS TDTYSYYWYN ENGETVSNQI SATGKYNIVV QNSCGTGKDS
LYLKNSLLEM TNLITANNDN LNDCMIATSN NKHETIQLSI YNSWGSCVFS ENNYHNNWCP
GNELSNGVYY YEARYNNACS KKGWIEIVR