Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0345 |
Symbol | |
ID | 4186212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 413427 |
End bp | 415496 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070353 |
Product | hypothetical protein |
Protein accession | YP_676975 |
Protein GI | 110636768 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.293948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA TATCAATCAT TATATCATTC TTTATCGTTA GCGCTAATCT TTTCGCCCAG CACGAAACCG ATGAGCGTAT ATTAGGCTTT AAATACAAAT TGAAATTTAC TAATAATACA CCACTGATTG TTACAGAAAA TTCAAATTTG TATGATCCAT ATAATCCAAA CTATAGAGGA AATTTACAAA CACCATATGC AAATTCTATT TGTGATACAT TAGGTAATGT GCTTTTTTAT TATGACGGTG CCAATATTTA TGAACCAAAT GGGCAGGTAA TGAGAAATGG GACATTACAC CAATATAATT TCAGTTCACT GTATGCAACA AGCCTGATTG TTCCGATTGA AGAAAGTAAT CGTAGATACT ATTATCTGTT TGAAACATTG CCACATGAAG AAATGTGGGA TTATGTTACC AATAGGCCAA TTAATGATAT AACAAGTTGC TATTATCCAA ATAAATGTTT TAAATTTTGG GATTTGTGTA AACTGGAATA TCATATCATT GATATGCATG GGAATGGGGG TAGGGGTAAC GTAATAAGTA AGAATATTTT TCTGAAAGAC TCGGTAGCCC CTTCCATCAG TGGAATTAAA CATCAAAATA ATATTGATAC CTGGGTTTCT GTATTGGGAT ACCGCAGCAA TAACATTTTA AACTACAGCG TGAATTCTTG CGAAATTAAA GCACCTGTAG TAAATACCAT TCCGGATTTT GAATACAAAG AAAACCCTTT GTATATTCCG TACTCTCCTT CAGCATATAC GGGTTATCAG CTTGTATATG CTACGAAAGG AGATTTTGGT GCATTTCCCG GCAATAAAAT TTCGGATAAT CCAGACCCTT CTTTTATTCC ATATTATTTG TTTGTTGCTC CCTTTGATAA CCAGACAGGA AAGTTCAATT TCAGTTTGAT GCAGACAATA AATGTGCGCA GCGGGGTACA TGCGCATTTG TTTTCGCATG ATTCAAAATA TTTATATTGT AATGATAGTC ATTTATTGTC GTTTGTATGG ATATACCAAT ATGAACTTAG TACGGGCATA TCTACGCCTC TATATTATAG TAATATCCCT TTTGATAATA GCTTATCTGG CACTGATTAC GGCAAAGACA ATAACATCCT TATTTATAAA TATAAAGCAC GGATACAAAG TGGAAGAGCT AAATATGTAA GCTATTTGGG TGAAATCCTC CATATTGATC AGCCTTTCTT GCCGGGCAAC TTAATAGATT CATTACCAAT TCCTGCAGCA GAACAACCGG ATTATAAACC TCAATACACG TACATTGCCC GCAATAACTA CATCTACAAT TTCTATCACC CCGATTATAA AAAGCCGGAT GCTTTTCCTG TTGCACATTC CGTTTCAAAT ACAATCACAT CACCTGCGTG TTTTAATCAA GCCGTTACAT TAAAAGGAAA TACAAACATT CCGGCAGACA GCATGTATTG GCTTATTAAA AAAACATCAG ATACTAACTG GCAGCGTGTT AATTCAGATA CATTTGACAT AACGCTTAGT CCCGGTACAT ACACCGCCAG TCTGGTTTCG TACAAATACT GTTTGCCGGA CAGCGCTACG CAGCAATTTA CCATTGAGGA TTATCCAGCG GTACGTTTAG CAGACGATAC GCTGTACACC TGCGAATCAA AGCCTGTTGA ACTTCCTTCC ACTGATACCT ACAGCTATTA TTGGTACAAC GAAAATGGAG AAACCGTTTC CAATCAGATT TCTGCAACTG GTAAATACAA CATAGTTGTA CAGAACAGTT GCGGTACAGG TAAGGATAGT TTGTATCTTA AAAACAGCCT ACTTGAAATG ACTAATTTAA TTACGGCAAA TAATGACAAC CTGAATGATT GTATGATTGC CACCTCAAAC AATAAGCATG AAACCATACA GCTTAGCATT TATAATTCCT GGGGCAGCTG TGTTTTCTCT GAAAATAACT ATCATAACAA CTGGTGCCCC GGTAATGAAT TAAGTAATGG CGTTTATTAT TACGAAGCCA GGTACAACAA CGCTTGCAGT AAAAAAGGCT GGATAGAAAT TGTACGCTGA
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Protein sequence | MKIISIIISF FIVSANLFAQ HETDERILGF KYKLKFTNNT PLIVTENSNL YDPYNPNYRG NLQTPYANSI CDTLGNVLFY YDGANIYEPN GQVMRNGTLH QYNFSSLYAT SLIVPIEESN RRYYYLFETL PHEEMWDYVT NRPINDITSC YYPNKCFKFW DLCKLEYHII DMHGNGGRGN VISKNIFLKD SVAPSISGIK HQNNIDTWVS VLGYRSNNIL NYSVNSCEIK APVVNTIPDF EYKENPLYIP YSPSAYTGYQ LVYATKGDFG AFPGNKISDN PDPSFIPYYL FVAPFDNQTG KFNFSLMQTI NVRSGVHAHL FSHDSKYLYC NDSHLLSFVW IYQYELSTGI STPLYYSNIP FDNSLSGTDY GKDNNILIYK YKARIQSGRA KYVSYLGEIL HIDQPFLPGN LIDSLPIPAA EQPDYKPQYT YIARNNYIYN FYHPDYKKPD AFPVAHSVSN TITSPACFNQ AVTLKGNTNI PADSMYWLIK KTSDTNWQRV NSDTFDITLS PGTYTASLVS YKYCLPDSAT QQFTIEDYPA VRLADDTLYT CESKPVELPS TDTYSYYWYN ENGETVSNQI SATGKYNIVV QNSCGTGKDS LYLKNSLLEM TNLITANNDN LNDCMIATSN NKHETIQLSI YNSWGSCVFS ENNYHNNWCP GNELSNGVYY YEARYNNACS KKGWIEIVR
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