Gene CHU_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0344 
Symbol 
ID4186211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp410715 
End bp413357 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content40% 
IMG OID638070352 
Producthypothetical protein 
Protein accessionYP_676974 
Protein GI110636767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.36736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC CGGCACTAAT GGCCAAGGAT TTGGATTTTA CAACCTCGCA ACCCTGTAAT 
AGTACAGAAC AAGAGTATGA AATCAATTAT GATAATGCGG GTAATCTGGA ATGGATTATT
GAAGGCGGGG AAATTATAAA ATTTGCAAAT GATAACACCC CCCAGGGATT GAGTCAAAGT
TATATGGGCA CACAATATTA CCCAAGTCCA TATAGTAGTA ATAATATTTA TTGGTTAAAT
ACATTAAACT ATACACGGTA TAAATTTTCT GGATTGAGTA ATGTAGAGGC TACATTTTTA
AATCCCTATA CCAATCAGCA AATGAATGCA CAAAATTTGT CAAATAACGG CACCCCAGAT
TTTAACAATC CACTTAAAAA AATTACTGTA AGATGGTATC CTGGATACAC CGGACAAAGG
AAAATAACCT GCATTGGCAG AAGTCTGGGC TTTTTGGGAA ATGAAGTAGG AAATACGACT
AAATACATCA ACTTCCCGGC TTCGATCCCA ACTAATTTTG TACTGACTGC ATCGGCAACA
AATGCATTTT GCAATCAAGG TGTGACCATT TCCGGTGGGC CTGCAAATGG TGTAAATTAC
AATTGGAATA CAAATGGCGG AGTTATACAA AACAGCTGGA ATGGAGGAAT TTCCATCAGC
CGTTTTACAA ACGATGGTAT CGTGCCTATA ACATTGACGG CGAGTAACGA ATGTTACAGT
GTAACCAAAA CCGTAACGCT GAACATCGCC CAGCCTGATT TCGGTCACGT TACTCAGAAC
AATGTTAATG TAGACGTACC TGGCAGTCTT GTAACACTTG ATTGCGATGG TAAATTCAGC
GTAAGTATGC CCGTTTATGT AAGCAATTCT GCCGTGTATA CCTGGGAACT GCCCGGGACA
TCTTACGATG CTCAAACCAA TACCTATACA AAAACAATCG TAAGCGGTGT TAACAAACAA
AGCGTACAGG GCCAGTTACC GGTACAAGGT TTAACAGACT TTGTAGGTAA GGTAACAATC
ACAGGTGTGT GCGGAGCGCC CGTAGTAAAA ACATTTATTA TTCGCCCGGC ATTACGGCCA
ACCGTAGATC CTGAAATTTA TTCCTGTTCA AACAGTGTGG AAATTAAGGT AAATAATCCT
ACAGGAACCA GCAATATCAA TACGTGGGTA AGATATTCCA CACCCTTAGG TCTGCAGTCA
ACAATAACAA ATCAAACGCC AACATCAGCC TTATTTACTT CAGCAAGTCC CGGAACGTAT
TACATTGCCA TTGGGGTGAA CGGTGCTGGC GGGTGTTATA CTGAATTGCA GAGTACAGTG
CGTACAGGAA CTGCCGGTTA TAATCCAACA GCAAATACCG CAGGCTGGCA GTCTGGTGTG
TTAAGTGATA ACCGCAAAGC AGTAGGCAGT AACATTGTTG CGTACGGCGG TAATATTTAC
TTTTCAGGCA GAGACGGTAA AATCTATTAT TACAGCTTCA GCACGGCTTC TCAAAAATGG
ATCATCAATG AAATTCCCGG AATTACAAAT GCGCTGAAGC CGGTTGGTGG CGCGTTTACA
AAGATTGGTT TTGCAGCTCT GAATGGTGTT TCATATTTAT TCTATACTGA AAATGCCGCA
AATAAATTAT GGAAAATTGA TTTAGCAACA AATGTTGTTA GTGATGGTCT TTTTCCTAGT
GTAAATGCAT CTGACTTTAT CGCTGAAGGA AATGAGGTGT ATGCAATTAA AAAAGAAACA
AATGAATTAG TATCTAATTT AGGTTCAATT AATAATAATT TAGGCATAGC TATTTTAAAA
ACGATTATTC CTGGGTATGG TATAACATAT GTGCAAAATA ATAATTTGTA TTCAACTGCA
TTTGGACAAT TAACTTCTAC AGCAGATATA TATACAAGCT CAGATGTGGT TTATTATAAT
GGCTGGCTAT ATTATGCCCG CGGACAAAAA GGAAATGCCA ATTTATACCG CATGCAGCTA
ACCAATCCAT CCGCGGCGCA GCAGATAACA ACTAGTTCTA ATCTATCGGG TGTATTCAAT
ATCAATCCGG TATCAGGTGT GATTTATTAT GGTATACTGA ATCTGGGTGT TGCAAACAAC
ATTACTACAC AAACATCGGG TTTATACAAA GCCGGCGATG TGTATCAGGC ACATTTATCC
GGTACAGCCT GGGTGCTTAA TAAAGCAACA ACAGTAGTAA ATTACGAAGG CCTGGATATG
CTTATTCACA GCCCGGTATA CAGCGGAAAC CACCTGTATT ACGTAGGTGC CGGACATAAC
ACGGCAACGG GAGGTACAAT ACGTGAACTG GAAGTATGGA ACCTGTATTA TGAAAATGAT
TGTGCACCGG TTTTACAACG TGAAGGTTTG GATACAGATG CTACAGCCGA AAGCGTAGAT
GTACTGATGT ATCCAAATCC GTTTAATACG GAACTGGCAA TTGATCTGTC TTCTTATTCT
GAACAAGGCA ATACAACATC TGTATCAGTT GAAATAATAG ATGCAACAGG GAAAAGCATA
TATAAATCTA CGTTGCCATC AGAATTAGCT TCTATTACAA GTGCGGACTG GTCAGCTGGT
ATATATATCG TAAAAATCAC ATATAACGAT AAGCGTATAA GTAAAAAAGT AGTTAAATAT
TAA
 
Protein sequence
MSGPALMAKD LDFTTSQPCN STEQEYEINY DNAGNLEWII EGGEIIKFAN DNTPQGLSQS 
YMGTQYYPSP YSSNNIYWLN TLNYTRYKFS GLSNVEATFL NPYTNQQMNA QNLSNNGTPD
FNNPLKKITV RWYPGYTGQR KITCIGRSLG FLGNEVGNTT KYINFPASIP TNFVLTASAT
NAFCNQGVTI SGGPANGVNY NWNTNGGVIQ NSWNGGISIS RFTNDGIVPI TLTASNECYS
VTKTVTLNIA QPDFGHVTQN NVNVDVPGSL VTLDCDGKFS VSMPVYVSNS AVYTWELPGT
SYDAQTNTYT KTIVSGVNKQ SVQGQLPVQG LTDFVGKVTI TGVCGAPVVK TFIIRPALRP
TVDPEIYSCS NSVEIKVNNP TGTSNINTWV RYSTPLGLQS TITNQTPTSA LFTSASPGTY
YIAIGVNGAG GCYTELQSTV RTGTAGYNPT ANTAGWQSGV LSDNRKAVGS NIVAYGGNIY
FSGRDGKIYY YSFSTASQKW IINEIPGITN ALKPVGGAFT KIGFAALNGV SYLFYTENAA
NKLWKIDLAT NVVSDGLFPS VNASDFIAEG NEVYAIKKET NELVSNLGSI NNNLGIAILK
TIIPGYGITY VQNNNLYSTA FGQLTSTADI YTSSDVVYYN GWLYYARGQK GNANLYRMQL
TNPSAAQQIT TSSNLSGVFN INPVSGVIYY GILNLGVANN ITTQTSGLYK AGDVYQAHLS
GTAWVLNKAT TVVNYEGLDM LIHSPVYSGN HLYYVGAGHN TATGGTIREL EVWNLYYEND
CAPVLQREGL DTDATAESVD VLMYPNPFNT ELAIDLSSYS EQGNTTSVSV EIIDATGKSI
YKSTLPSELA SITSADWSAG IYIVKITYND KRISKKVVKY