Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0344 |
Symbol | |
ID | 4186211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 410715 |
End bp | 413357 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070352 |
Product | hypothetical protein |
Protein accession | YP_676974 |
Protein GI | 110636767 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.36736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGGC CGGCACTAAT GGCCAAGGAT TTGGATTTTA CAACCTCGCA ACCCTGTAAT AGTACAGAAC AAGAGTATGA AATCAATTAT GATAATGCGG GTAATCTGGA ATGGATTATT GAAGGCGGGG AAATTATAAA ATTTGCAAAT GATAACACCC CCCAGGGATT GAGTCAAAGT TATATGGGCA CACAATATTA CCCAAGTCCA TATAGTAGTA ATAATATTTA TTGGTTAAAT ACATTAAACT ATACACGGTA TAAATTTTCT GGATTGAGTA ATGTAGAGGC TACATTTTTA AATCCCTATA CCAATCAGCA AATGAATGCA CAAAATTTGT CAAATAACGG CACCCCAGAT TTTAACAATC CACTTAAAAA AATTACTGTA AGATGGTATC CTGGATACAC CGGACAAAGG AAAATAACCT GCATTGGCAG AAGTCTGGGC TTTTTGGGAA ATGAAGTAGG AAATACGACT AAATACATCA ACTTCCCGGC TTCGATCCCA ACTAATTTTG TACTGACTGC ATCGGCAACA AATGCATTTT GCAATCAAGG TGTGACCATT TCCGGTGGGC CTGCAAATGG TGTAAATTAC AATTGGAATA CAAATGGCGG AGTTATACAA AACAGCTGGA ATGGAGGAAT TTCCATCAGC CGTTTTACAA ACGATGGTAT CGTGCCTATA ACATTGACGG CGAGTAACGA ATGTTACAGT GTAACCAAAA CCGTAACGCT GAACATCGCC CAGCCTGATT TCGGTCACGT TACTCAGAAC AATGTTAATG TAGACGTACC TGGCAGTCTT GTAACACTTG ATTGCGATGG TAAATTCAGC GTAAGTATGC CCGTTTATGT AAGCAATTCT GCCGTGTATA CCTGGGAACT GCCCGGGACA TCTTACGATG CTCAAACCAA TACCTATACA AAAACAATCG TAAGCGGTGT TAACAAACAA AGCGTACAGG GCCAGTTACC GGTACAAGGT TTAACAGACT TTGTAGGTAA GGTAACAATC ACAGGTGTGT GCGGAGCGCC CGTAGTAAAA ACATTTATTA TTCGCCCGGC ATTACGGCCA ACCGTAGATC CTGAAATTTA TTCCTGTTCA AACAGTGTGG AAATTAAGGT AAATAATCCT ACAGGAACCA GCAATATCAA TACGTGGGTA AGATATTCCA CACCCTTAGG TCTGCAGTCA ACAATAACAA ATCAAACGCC AACATCAGCC TTATTTACTT CAGCAAGTCC CGGAACGTAT TACATTGCCA TTGGGGTGAA CGGTGCTGGC GGGTGTTATA CTGAATTGCA GAGTACAGTG CGTACAGGAA CTGCCGGTTA TAATCCAACA GCAAATACCG CAGGCTGGCA GTCTGGTGTG TTAAGTGATA ACCGCAAAGC AGTAGGCAGT AACATTGTTG CGTACGGCGG TAATATTTAC TTTTCAGGCA GAGACGGTAA AATCTATTAT TACAGCTTCA GCACGGCTTC TCAAAAATGG ATCATCAATG AAATTCCCGG AATTACAAAT GCGCTGAAGC CGGTTGGTGG CGCGTTTACA AAGATTGGTT TTGCAGCTCT GAATGGTGTT TCATATTTAT TCTATACTGA AAATGCCGCA AATAAATTAT GGAAAATTGA TTTAGCAACA AATGTTGTTA GTGATGGTCT TTTTCCTAGT GTAAATGCAT CTGACTTTAT CGCTGAAGGA AATGAGGTGT ATGCAATTAA AAAAGAAACA AATGAATTAG TATCTAATTT AGGTTCAATT AATAATAATT TAGGCATAGC TATTTTAAAA ACGATTATTC CTGGGTATGG TATAACATAT GTGCAAAATA ATAATTTGTA TTCAACTGCA TTTGGACAAT TAACTTCTAC AGCAGATATA TATACAAGCT CAGATGTGGT TTATTATAAT GGCTGGCTAT ATTATGCCCG CGGACAAAAA GGAAATGCCA ATTTATACCG CATGCAGCTA ACCAATCCAT CCGCGGCGCA GCAGATAACA ACTAGTTCTA ATCTATCGGG TGTATTCAAT ATCAATCCGG TATCAGGTGT GATTTATTAT GGTATACTGA ATCTGGGTGT TGCAAACAAC ATTACTACAC AAACATCGGG TTTATACAAA GCCGGCGATG TGTATCAGGC ACATTTATCC GGTACAGCCT GGGTGCTTAA TAAAGCAACA ACAGTAGTAA ATTACGAAGG CCTGGATATG CTTATTCACA GCCCGGTATA CAGCGGAAAC CACCTGTATT ACGTAGGTGC CGGACATAAC ACGGCAACGG GAGGTACAAT ACGTGAACTG GAAGTATGGA ACCTGTATTA TGAAAATGAT TGTGCACCGG TTTTACAACG TGAAGGTTTG GATACAGATG CTACAGCCGA AAGCGTAGAT GTACTGATGT ATCCAAATCC GTTTAATACG GAACTGGCAA TTGATCTGTC TTCTTATTCT GAACAAGGCA ATACAACATC TGTATCAGTT GAAATAATAG ATGCAACAGG GAAAAGCATA TATAAATCTA CGTTGCCATC AGAATTAGCT TCTATTACAA GTGCGGACTG GTCAGCTGGT ATATATATCG TAAAAATCAC ATATAACGAT AAGCGTATAA GTAAAAAAGT AGTTAAATAT TAA
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Protein sequence | MSGPALMAKD LDFTTSQPCN STEQEYEINY DNAGNLEWII EGGEIIKFAN DNTPQGLSQS YMGTQYYPSP YSSNNIYWLN TLNYTRYKFS GLSNVEATFL NPYTNQQMNA QNLSNNGTPD FNNPLKKITV RWYPGYTGQR KITCIGRSLG FLGNEVGNTT KYINFPASIP TNFVLTASAT NAFCNQGVTI SGGPANGVNY NWNTNGGVIQ NSWNGGISIS RFTNDGIVPI TLTASNECYS VTKTVTLNIA QPDFGHVTQN NVNVDVPGSL VTLDCDGKFS VSMPVYVSNS AVYTWELPGT SYDAQTNTYT KTIVSGVNKQ SVQGQLPVQG LTDFVGKVTI TGVCGAPVVK TFIIRPALRP TVDPEIYSCS NSVEIKVNNP TGTSNINTWV RYSTPLGLQS TITNQTPTSA LFTSASPGTY YIAIGVNGAG GCYTELQSTV RTGTAGYNPT ANTAGWQSGV LSDNRKAVGS NIVAYGGNIY FSGRDGKIYY YSFSTASQKW IINEIPGITN ALKPVGGAFT KIGFAALNGV SYLFYTENAA NKLWKIDLAT NVVSDGLFPS VNASDFIAEG NEVYAIKKET NELVSNLGSI NNNLGIAILK TIIPGYGITY VQNNNLYSTA FGQLTSTADI YTSSDVVYYN GWLYYARGQK GNANLYRMQL TNPSAAQQIT TSSNLSGVFN INPVSGVIYY GILNLGVANN ITTQTSGLYK AGDVYQAHLS GTAWVLNKAT TVVNYEGLDM LIHSPVYSGN HLYYVGAGHN TATGGTIREL EVWNLYYEND CAPVLQREGL DTDATAESVD VLMYPNPFNT ELAIDLSSYS EQGNTTSVSV EIIDATGKSI YKSTLPSELA SITSADWSAG IYIVKITYND KRISKKVVKY
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