| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0336 |
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| Symbol | atpD |
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| ID | 4185518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 403833 |
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| End bp | 405338 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638070344 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_676966 |
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| Protein GI | 110636759 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA TTGGTAAAAT CACTCAGATT ATTGGTCCGG TTGTAGACGT TGGATTTGAA
GGAGAGTACG CTCTTCCGCA AATTTTAGAT GCATTGGAAG TAACTCGTCC GGATGGACAA
AAAGTAATCC TTGAATGTCA GCAGCATTTA GGAGAAGATC GTGTACGTAC AATCGCGATG
GACTCTACAG ATGGTTTGAC AAGAGGAATG GAAGTTAAAA CATACGGTAT GCCGATTTCT
ATGCCTGTAG GCGAAGATAT CCGTGGCCGT TTATATAATG TGGTTGGCGA TGCAATCGAT
GGTATTCCAT CGGGAGTAGC TGCTAACCGT ATGTCAATTC ACCGTCAGGC TCCTAAATTT
GAAGATTTAT CTACAAATAC AGAAGTATTG TTTACGGGTA TCAAAGTAAT TGATTTGCTT
GAGCCATATG TAAAAGGTGG TAAAATCGGT CTTTTCGGTG GTGCCGGTGT AGGTAAAACA
GTGTTGATCA TGGAATTGAT CAACAACATT GCAAAAGCAT ATGCAGGTCT TTCTGTATTT
GCCGGTGTTG GTGAGCGTAC ACGTGAAGGA AACGATTTGC TTCGTGAAAT GATTGAATCA
AACGTAATCC GTTACGGGGA TGAATTCAAA CATTCTATGG AAAAAGGAGA GTGGGATTTA
TCTAAAGTAG ATGCTACTGA ATTATTAAAG TCTCAGGCAA CATTGGTGTT CGGTCAGATG
AACGAACCTC CTGGAGCAAG AGCAAGAGTT GCGTTGGCTG GTCTTACAGT TGCGGAATAT
TTCCGTGATG GAGATGGCCA GGGCCAGGGC CGTGATATCT TATTCTTTAT TGATAACATA
TTCAGATTTA CACAAGCAGG TTCAGAAGTA TCTGCCTTGT TAGGTCGTAT GCCATCTGCC
GTAGGTTACC AACCGACATT GGCAACAGAA ATGGGTGCGA TGCAGGAACG TATTACTTCA
ACAAAAAGAG GTTCTATTAC ATCTGTACAA GCCGTTTATG TACCAGCTGA TGATTTAACC
GATCCGGCTC CGGCAACTAC ATTTGCGCAC TTGGATGCTA CAACGGTATT GAACCGTAAA
ATTTCTGAAT TAGGTATCTA TCCTGCTGTG GATCCATTGG ATTCTACATC ACGTATCCTT
AGCCCTGAAA TTTTAGGTAG CGAACATTAC GATTGCGCAC AACGTGTAAA AGAAATTTTA
CAGCGTTACA AAGAACTTCA GGATATCATC GCCATTCTTG GTATGGATGA ACTTTCTGAA
GAAGATAAGC AGGCGGTTCA CCGCGCGCGT CGTGTGCAAC GTTTCTTATC TCAGCCTTTC
CACGTAGCGG AACAGTTTAC AGGTCTAAAA GGTGAGTTAG TAAATATTAA AGATACTATC
AAAGGATTTA ACATGATCAT GGACGGTGCA TTAGACCACT TGCCTGAAGC AGCGTTTAAC
CTTGTAGGTA GCATTGAGCA GGCAATTGCT AAAGGCGAGA AGCTTGTTGC TGATTCTAAA
AAATAA
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| Protein sequence | MANIGKITQI IGPVVDVGFE GEYALPQILD ALEVTRPDGQ KVILECQQHL GEDRVRTIAM
DSTDGLTRGM EVKTYGMPIS MPVGEDIRGR LYNVVGDAID GIPSGVAANR MSIHRQAPKF
EDLSTNTEVL FTGIKVIDLL EPYVKGGKIG LFGGAGVGKT VLIMELINNI AKAYAGLSVF
AGVGERTREG NDLLREMIES NVIRYGDEFK HSMEKGEWDL SKVDATELLK SQATLVFGQM
NEPPGARARV ALAGLTVAEY FRDGDGQGQG RDILFFIDNI FRFTQAGSEV SALLGRMPSA
VGYQPTLATE MGAMQERITS TKRGSITSVQ AVYVPADDLT DPAPATTFAH LDATTVLNRK
ISELGIYPAV DPLDSTSRIL SPEILGSEHY DCAQRVKEIL QRYKELQDII AILGMDELSE
EDKQAVHRAR RVQRFLSQPF HVAEQFTGLK GELVNIKDTI KGFNMIMDGA LDHLPEAAFN
LVGSIEQAIA KGEKLVADSK K
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