Gene CHU_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0326 
SymbolmenA 
ID4185508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp392413 
End bp393318 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content43% 
IMG OID638070334 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_676956 
Protein GI110636749 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTG TTACACATTG GATAAAAGCA TTCAGGTTAC GTACTTTGCC GCTTGCGCTC 
TCAAGTATCG GCATGGCAGG CTTTCTTGCA TTCGATCACA AACATTTCAA CACACCGGTA
TTTGTATTGT GTGTGCTTAC AACATTGTTT CTGCAAATAT TATCTAACCT TGCAAACGAT
TACGGCGATT TTATGAATGG CGCGGACGGC GAACACCGCG TTGGTCCCGC ACGTGCTGTA
CAAAGCGGTG CTATTAGCAT AAAGGAAATG AAAATTGCTA TTGTACTGTT TGCGGCGTGC
AGCTTTATCG CAGGTGTTTC ATTGCTGTAT CAGGTAAAAG ATTTGCTCAG TGTAAATATG
CTGAGTGCAT TTCTGCTGGT AGGAATTCTG TCTATTGCAG CAGCAGTAAC CTACACATCA
GGAAAAAAAC CATATGGATA TGCTGGCTTG GGAGATATAT CGGTGTTTAT CTTTTTTGGA
TTGGTAGCCG TTTGCGGAAC ATATTTCTTA CAGGCAGGTG AAATCAACAG CGATGTTTTT
CTGCCGGCCA TCAGCTGCGG ATTACTTTCT ACTGCCGTGC TTAACGTAAA CAACCTGCGC
GACATTGAAT CCGACGCACT GGCGGGCAAA CGATCCATTC CCGTACGTAT CGGACCGGTT
AAAGGCCGGT TTTACCACCT GTTTTTAATA GCAGCAGCCT GGGTTTGTGC AAGCATATAC
GTATTCAATC ATTTTACATC CGTCTTTAAT GTGCTGTATC TTGCCACATT GCCCTTATTT
ATATGGCATC TGGTGTTGGT ATTCAAAACA AAAGAACCCC GCTTATTAGA CCCATATTTA
AAGCAATTGG CTTTGAGTAC CTTGCTTTTT GTTATAACTT ACGGTATTGG AATTTCGTAT
TTTTAA
 
Protein sequence
MAAVTHWIKA FRLRTLPLAL SSIGMAGFLA FDHKHFNTPV FVLCVLTTLF LQILSNLAND 
YGDFMNGADG EHRVGPARAV QSGAISIKEM KIAIVLFAAC SFIAGVSLLY QVKDLLSVNM
LSAFLLVGIL SIAAAVTYTS GKKPYGYAGL GDISVFIFFG LVAVCGTYFL QAGEINSDVF
LPAISCGLLS TAVLNVNNLR DIESDALAGK RSIPVRIGPV KGRFYHLFLI AAAWVCASIY
VFNHFTSVFN VLYLATLPLF IWHLVLVFKT KEPRLLDPYL KQLALSTLLF VITYGIGISY
F