Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0306 |
Symbol | trmH |
ID | 4186872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 364633 |
End bp | 365439 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638070315 |
Product | TrmH family tRNA methyltransferase |
Protein accession | YP_676937 |
Protein GI | 110636730 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAA ACTACCCAAA GAAACGGTTT TCTTCGTCAT ACGATGAAAA CAAACCTGCT AACGACAAAG ATATGATTTT CGGGATCCGC CCGGTGATTG AGGCTCTGGA AGCTGGCAAA GAAATCGACA AGATCTTAAT ACAGCGAAAT ATTGAACAGG CAGTTGTTCA GGAATTGTTT GAATTAGCGA ATCGTGTTAA AGTACCTGTG ATAAAAGTTC CGGTTGAAAA ACTGGACCGC GTAACGCGCA AAAATCACCA GGGTGTTATT TGTTATTTAT CGGCTATCAA TTTTGCTTCG TTAGATAACA TCGTATCTGC CTGTTTTGAA AGCGGCAAAA ACCCATTGCT GGTAATGCTT GACCGTGTAA CAGATGTACG TAATTTTGGT GCAGTTGCAC GGAGTGCAGA GTGTTTGGGA GTGGATGCCA TGATCGTTCC TTCAAGAGGT GCCGCTCAAT TAAACAGCGA TGCGGTTAAA ACATCTGCCG GTGCGTTATA CCACATTCCG GTTTGCCGTG TGGATCATTT GATCGATACG GTAAAATATC TTAAACAGTG CGGCCTGCGC ATTATCGCAT GTTCAGAAAA AGCAAGCATC AATGTATACG ACGAAGATCT CACCGACCCA TGTGTTATTC TGATGGGCAG CGAAGAAGAT GGAATCAGCA TGGACCTGCT GCGGTATGCA GATGCACATG TTACCATACC TATGAGCGGA CATATTAACT CTTTGAATGT TTCCGTTGCA ACCGGCATGA TCTTATCAGA AGTAACAAGA CAGCGATTGA AACAACAATC AAAATAG
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Protein sequence | MDRNYPKKRF SSSYDENKPA NDKDMIFGIR PVIEALEAGK EIDKILIQRN IEQAVVQELF ELANRVKVPV IKVPVEKLDR VTRKNHQGVI CYLSAINFAS LDNIVSACFE SGKNPLLVML DRVTDVRNFG AVARSAECLG VDAMIVPSRG AAQLNSDAVK TSAGALYHIP VCRVDHLIDT VKYLKQCGLR IIACSEKASI NVYDEDLTDP CVILMGSEED GISMDLLRYA DAHVTIPMSG HINSLNVSVA TGMILSEVTR QRLKQQSK
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