Gene CHU_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0292 
Symbol 
ID4185768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp351163 
End bp352707 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content44% 
IMG OID638070301 
Producthypothetical protein 
Protein accessionYP_676923 
Protein GI110636716 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG ATGCCCTTCC AGCATTTGAT ATTATTGAAG TACGTTTTAA AAACGGGAGA 
AAAGAATTTT TCAGGAATAC AAAATCGTTA GAGTTATATG CCGGGGACCC TATTGTTGTA
GAAGTACAAT CCGGGCACCA TATCGGCTAT GTTTCTATGC AGGGTGAAAT TGTACGCCTG
CAAATGAAAA AGAAGAATGT GCTGAATAAC GATGATATTA AGGCCATTTA CCGTAAAGCA
ACGCAAAAAG ATCTGGAGAA ATTTGAACAG GCGAAAAACC GCGAAGCAAG TTCTTTATAC
CGTACGCGTG AAATAATTGT TGATCAGAAA TTAGGTATGA AATTATCTGA TGTGGAATTT
CAGGCAGACA ATACAAAAGT TACTTTTTAT TATTCTGCGG AAGACCGTGT TGATTTCCGG
GAGCTGATTA AAATGCTGGC CGGTGAATTC AAGGTGCGTA TTGAAATGAA ACAGATCAGC
CTGCGCCATG AAGCAGCTCG TTTAGGCGGC ATCGGTTCGT GCGGACGGGA ACTTTGCTGC
TCAACCTGGC TGACAGATTT TAAAAACGTG AATACATCTG CTGCGCGTTA TCAGAATTTA
TCGTTAAACC CATCCAAGCT TTCAGGCCAG TGCGGCCGCC TGAAGTGCTG TTTAAACTAT
GAGCTGGATA CGTATCTGAA TGCATTAAAA GGAATTCCTG AAGTTGAGGT TCCGCTTAAA
ACCGCGATGG GGAATGCAAC GCTTCAGAAA ACAGACATCT TCAAACGTAT TATGTGGTTC
GGTTTCCAGG ACGAGACTAC CTGGTTCCCG TTGCAGGTTG AACGTGTTAT TGAAATTATA
GAAATGAATA AGGCAGGCAA AACACCTGCA ACGTTAGAAT CGAACGAGGA GATAATCAAA
GACGATCGTA TTATGATCCG TGAGAAAGAA GAACTTTCAC GCTTTGATGA TAAATTCAAA
TCGAAAAATA AAAAACGTAA AAAGAAACGT TCCGGTGACG ATGCTTCAGA CCGTACTGAA
CGCGCACAGC GTCCTGCGGT GAACATTCAG CGTGTGAGCC AGAATCAGCA GGTGCCAAGA
AGTGAAAAGC CGCAACAAGC TGCTGAACCA CGCAACGAAA ATCAAAACAA TTCAAACAGA
CCGCAACGTA TTTCTCCGAA TCAGCAGGAG GTGCGGAAAG AAGCTCCGCG TAACGAAAAC
AAAAACAGGG AAGGCAGTAA ACAGCCCAAC AATAATTCTA ACCGTCCGCA GCGCGTTAAC
CAGCAAAACA CACCGCAGTC AAATCAGCAG CAGCCGAATC CAAAAAAGCA GCAGCCGAAC
CAGCCTGACC GTGACCGCAC GCCAAGACAA GGGAACCAAC AGCAGCATAC AAATCCCAAA
CCACAGGGCC AACAACATAA AGAACCGAAG AAGCCTCAGC AGGACAATCA ATCAACGGGC
GGAAATAAGC ACCAATTGAT TAAAAAACCT TCGGGCAACT TCCCTCCAAG ACAGAATAAT
CAAAACCCGG GAGAAGAAAG TTCACCAAAC AACTCCAATA ACTAA
 
Protein sequence
MELDALPAFD IIEVRFKNGR KEFFRNTKSL ELYAGDPIVV EVQSGHHIGY VSMQGEIVRL 
QMKKKNVLNN DDIKAIYRKA TQKDLEKFEQ AKNREASSLY RTREIIVDQK LGMKLSDVEF
QADNTKVTFY YSAEDRVDFR ELIKMLAGEF KVRIEMKQIS LRHEAARLGG IGSCGRELCC
STWLTDFKNV NTSAARYQNL SLNPSKLSGQ CGRLKCCLNY ELDTYLNALK GIPEVEVPLK
TAMGNATLQK TDIFKRIMWF GFQDETTWFP LQVERVIEII EMNKAGKTPA TLESNEEIIK
DDRIMIREKE ELSRFDDKFK SKNKKRKKKR SGDDASDRTE RAQRPAVNIQ RVSQNQQVPR
SEKPQQAAEP RNENQNNSNR PQRISPNQQE VRKEAPRNEN KNREGSKQPN NNSNRPQRVN
QQNTPQSNQQ QPNPKKQQPN QPDRDRTPRQ GNQQQHTNPK PQGQQHKEPK KPQQDNQSTG
GNKHQLIKKP SGNFPPRQNN QNPGEESSPN NSNN