| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0283 |
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| Symbol | |
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| ID | 4185759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 341520 |
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| End bp | 344084 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070292 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_676914 |
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| Protein GI | 110636707 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGCTG TAGAAGCAGA TCTGCATAAA GATATCGAAC CTGTAGCATA TTATTTATAC
TGTGAGACTC AACGCGCAGA ATGTGCGATT CGCCTCAGTG ATCTGGACGA AGCGCAAGCA
ATTGTGCAAG CAGCATTGAA GCAGTGTCCG GCGGCACTGG TTAATTCCAA AGCGTTGCTT
CAAAATGCAC AGGCAAAAAT CTATTACCAG AAAGGATTAC TGGATCAGGC GCATGCAGAA
ATTATGTCTG CCATTGAATT ACTTAAAGGC GGCACTTCTT TTTATTGGAG ATCACCCTTA
TCTGAATGTT ATAATACAGA AGGATTGATT GATTGGCTCC GCGGTAACGA TGAAAAATCG
CTGGAGTATT TAAACCAGGC ACTCGAAATA CGAAAAGAAT TGTTTGGTGA ACATACCGCA
CAGGTGGCAG CCGTTTATAA TAACATGGGG CTGGTCTACT CCGGTATTGA TTCAGATGAA
GCAGTATTCT ATTATGAAAA TGCACTTGAA ATTTATCAAT CGATCTATCC GGAAAATCAT
CCGGCCCTTG CTGTTGCGTA CAGCAACCTC GCACAGATCT ACCGCAAACA GGAGGCATAT
AATACTGCAC TGACACAATA TGAAAAAGCT CTGGAAATAT GGGAGCAGCG TTACCCCGGT
ATGCACCCAA ATAAAGCTTT TGTGTATTCG GGTATGGCAC AAGTGTATGA AGACAAAGGT
GCGTATGACC AGGCATTAAC GCAGGCGAAA AAAGCATTGG AAATATATAA ACAGGAATAT
GGAAGACATC CGAATACTGC TGCGTGTTTT ACATTGATCG GTTCAATTTT TACCGGTCAG
CGGGAGTATA CCAAAGCGAT ACATGCATTT CAATTAGCAC TCATGTATAA CACCGCATCG
TTTACAGAAA CGGGATCAAA TCCTGATGTA AAAGAATATT TCGACGGACA ATTGTTGCTG
TCAACGTTAA CACACAAAGC AATTGCACTG TCAGGAAGAT CGTCTGAAAA AACATTGCGC
CTGCAAGATC TGACACAAGC CTTGTCGTGC TATCAGTCCT GTGACACTTT GCTGGATCAG
CTTCGGCAGA CACGTACCAG CAAGAATGAT AAAGTTGCGC TGGGCGCATA CAGTTATGAT
ATCTACGACA AAGCGGTTGA ATTAAGTCTG TTTCTTTCAC AGAATACATT CAAAAAGAAA
TACTATCAGC AGCTTGCATT CTATTTTGTT GAGCGCAGTA AGGCATCGGT GTTGCAGGAA
TCTATTTCAG AGGCAAAAGC GAAAAGTTTT GCCGGCATAC CGGATTCTAA AATTGAAGAA
GAAGATACGT ACAAAACAAC CATTACTTAT CTCGAACAAA AGCTTGCAAA AGGAATCAGT
GATAAAGATC AATTCAAAAC TGTTTCTGCA CAGCTGTTCG AAACAAAGAG GAAGTATGAA
GCATTTATAA CATCGCTGGA AAAAAATTAT CCGGCGTATT ATAATTTAAA ATATAATGTA
CAGCCTGTAA TAATGGAAGC CATTCAGGCA AAGCTTAGTG AGGGCGATTG TGTGCTGGAA
TATTTTGTTT CAGAAAAATC AAAAACGGTA ACAACGTTTG TTCTTACAAA CAAAGCCGTA
CGTGTATATA TGGTTCCGTT GAAAGATACC TACAGCAAGT ATATTTCCGG CATGCGTAAT
GCAATTAAGT TTGACAGTAA AGCCACATTT ATAAAAACAT CAACGGCACT ACACAAGCAA
TTAATTCCTT CTCTTCCTAA GCACTGCAGC CATCTGATCA TTATTCCCGA TGGAAAAATG
GCCGCTATTC CATTTGAAGC TTTGATAGAG AAACGCCCTA AACACGACAC AAGTAGTTAC
GCGCAAATGG GTTTTATGAT TAAAAAATAT GCAACAAGTT ATACCTATAC AGCATCATTG
TACGAAAATA CGCATGAAGC AGCAAAAGTA AAAAAAGTAT TATTATTTGC TCCCGTAGAC
TTCAGCGCTT CCAGCGATCT GAATGCATTA CCCGGGACAT TAGCGGAAGT GGATACATTA
ACAAGTCTTT GTACAAACAC AGCACAGGCA GATGTATACA CATATACGGC AGCTTCAAAA
GCAGTTCTGG TAAGCGATTC GCTTAGTGGC TATTCAATTA TACATTTGGC TACACATGGT
TTGGTAGATG AAGAACAGCC GGAATTGTCC TGTATTTATA CTTCCGGAAC TTCCGAAGAA
AATGACCGTA TATATGCAGG AGATATGTAT AATATGCATT TAAATGCAGC GTTGGTATCC
TTGTCCGCCT GTCAGACAGG TTTAGGTAAA ATTGAAAAGG GCGAAGGCAT GATCGGGTTG
TCCAGAGCAC TGTTTTATGC AGGAGCGGAT AATATTATGG TATCGTTATG GAAAGTATCC
GATCTGTCAA CACAAGTCTA CATGCAATAT TTTTACAGCA TCTACCTGTC AGAAAATTTT
ACAACGTTTG CGGAAGCAGC GCGTATTTCT AAAATTAAAT TATTGAATTC AGAAACATTT
AATAGTCCTT ATTATTGGGC TGCATTTATT TTAATTGGTA AATAA
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| Protein sequence | MYAVEADLHK DIEPVAYYLY CETQRAECAI RLSDLDEAQA IVQAALKQCP AALVNSKALL
QNAQAKIYYQ KGLLDQAHAE IMSAIELLKG GTSFYWRSPL SECYNTEGLI DWLRGNDEKS
LEYLNQALEI RKELFGEHTA QVAAVYNNMG LVYSGIDSDE AVFYYENALE IYQSIYPENH
PALAVAYSNL AQIYRKQEAY NTALTQYEKA LEIWEQRYPG MHPNKAFVYS GMAQVYEDKG
AYDQALTQAK KALEIYKQEY GRHPNTAACF TLIGSIFTGQ REYTKAIHAF QLALMYNTAS
FTETGSNPDV KEYFDGQLLL STLTHKAIAL SGRSSEKTLR LQDLTQALSC YQSCDTLLDQ
LRQTRTSKND KVALGAYSYD IYDKAVELSL FLSQNTFKKK YYQQLAFYFV ERSKASVLQE
SISEAKAKSF AGIPDSKIEE EDTYKTTITY LEQKLAKGIS DKDQFKTVSA QLFETKRKYE
AFITSLEKNY PAYYNLKYNV QPVIMEAIQA KLSEGDCVLE YFVSEKSKTV TTFVLTNKAV
RVYMVPLKDT YSKYISGMRN AIKFDSKATF IKTSTALHKQ LIPSLPKHCS HLIIIPDGKM
AAIPFEALIE KRPKHDTSSY AQMGFMIKKY ATSYTYTASL YENTHEAAKV KKVLLFAPVD
FSASSDLNAL PGTLAEVDTL TSLCTNTAQA DVYTYTAASK AVLVSDSLSG YSIIHLATHG
LVDEEQPELS CIYTSGTSEE NDRIYAGDMY NMHLNAALVS LSACQTGLGK IEKGEGMIGL
SRALFYAGAD NIMVSLWKVS DLSTQVYMQY FYSIYLSENF TTFAEAARIS KIKLLNSETF
NSPYYWAAFI LIGK
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