Gene CHU_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0278 
Symbol 
ID4185754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp336931 
End bp338382 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content40% 
IMG OID638070287 
Producthypothetical protein 
Protein accessionYP_676909 
Protein GI110636702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAGA TAAAAGCGTT ACTAATTAAA AATATCTGTT CATTATCGAT TTGCAGTATG 
AATAAGTCCG TTCCATTTGT ATGTGTTATC CTCGCGCTTT TATTTGCCGG GTCCTGCCGT
TCTGTAAAAT CAAAAGCCCC TGCCGAAGCC TATCAGAACT TTGAGTACAA AGCTCCCGTT
TCACATGTTG TAGTACCTGT TGAACTTTCG TTGCGTGAAA TCGAAACCGA ATTAAATACG
CAGCTGAATG GATTGATATA TGACGATGCG GATTTTGCAG ATGGCGTATT GATGAAAGTG
TGGAAAGTAA GCCCGATCTT ACTTTCTATG CGCGGCGAAG AAATTGTATA CGAAGTACCG
ATCAAGATCT GGTCTAAAAT TAAATGGGAA TTCAACCAGT TTGGTTTTAA TGTATCCGAT
GAATTCACTG CGGACGCATC CTTGCGCATG ACCTTCAATA CAAAATTAAA GATTGGGGTG
TTCTGGACAT TGGAACCACA AACAACGCTG CAGAAATACG ACTGGATTGA AAAGCCTGTC
ATTACTGGTG GAAGCATCTC GTTGCCTGTA ACCTTCATTG CCGACCGTGT GATCAAATCA
CAGCAAAAAG TAATTACCGA AGCCATTGAT AGTGAAATAA AAAATCAGAT TGAATTGAGA
AAGTATGTGG AAGAAGGATG GAACGCTTTA CATCAGCCCA TACAGTTATA CAATAACCCA
ACGGCCTGGC TTCGTGTCAG TCCAACCGGT ATTGTTGTAA CACCGTTAAC AGGCAATAAA
GATTTTGCAA CCGCTACCAT ACGTATCGAC GGTGTTGCAG AAACATTTCT CGGCGCCAAG
CCTGCTGTAA AGCTTACCAA CCTGCCCAAC GCAACATTTG CCAACAATGC CTCCGGTGAT
TTTGTTATTT CACTGATCAA TGAAATGAGT TACGAAGAAG CAAGCAAGCT GGCATATCAG
CATTTAGCCG GACAAACCTT TACTTCTTCC AACGGAAAGA AAAAAATCCG TATTGACAGT
GTACAGATAT ATGGCGGCGG TGAAAATTTA ATTATTAAAA CAAAAGTATC CGGAAACGTT
AACGGACATA TTTACCTCAA AGGAAAACCT TCCTATGATT CTGCTGCACA AGTTGTTTAT
TTAAGAAATC TGGATTATTC CATTGAAACA AAAAATGCCA TGGTTAAAAC CGGCAACTGG
ATTCTTAAAA GTACCTTAAC CAAACGTATG CAGGAAGCCC TGCGTTATTC GGTTGCAGCA
GATATGGCTG AAATGAAAAA GCAAGCCAAT GCCTACATCA GTTCGTACAA GATCAGCAAA
AATGTTGAAG TGAAAGCAAA TCTTAATCAG CTTCAGCCTA AAGAATTTTT CATCACGCAA
GAGTCGATTA AAGCGGTGAT CTATGCAACC GGTTCCATGA AATTATCTGT TAAAGGACTG
GATATTCCCT GA
 
Protein sequence
MNKIKALLIK NICSLSICSM NKSVPFVCVI LALLFAGSCR SVKSKAPAEA YQNFEYKAPV 
SHVVVPVELS LREIETELNT QLNGLIYDDA DFADGVLMKV WKVSPILLSM RGEEIVYEVP
IKIWSKIKWE FNQFGFNVSD EFTADASLRM TFNTKLKIGV FWTLEPQTTL QKYDWIEKPV
ITGGSISLPV TFIADRVIKS QQKVITEAID SEIKNQIELR KYVEEGWNAL HQPIQLYNNP
TAWLRVSPTG IVVTPLTGNK DFATATIRID GVAETFLGAK PAVKLTNLPN ATFANNASGD
FVISLINEMS YEEASKLAYQ HLAGQTFTSS NGKKKIRIDS VQIYGGGENL IIKTKVSGNV
NGHIYLKGKP SYDSAAQVVY LRNLDYSIET KNAMVKTGNW ILKSTLTKRM QEALRYSVAA
DMAEMKKQAN AYISSYKISK NVEVKANLNQ LQPKEFFITQ ESIKAVIYAT GSMKLSVKGL
DIP