| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0268 |
|---|
| Symbol | |
|---|
| ID | 4184032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 325529 |
|---|
| End bp | 327343 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638070278 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_676900 |
|---|
| Protein GI | 110636693 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ATTTATTAGC AATCCTTTCT CTTCTGTTTA TTTCCGCTTC ACTCACGGCG
CAAACAACAA ACACCTATGT TGTGGCAGAC AACGGGCCTT ATATGATGTC ATGCAGTGAT
ACGCTTATCA CCCTTGCTGA CATTTATGAA AAAACCGGCA TTCGTGATCT GAACGACCCG
AATGATAATG TGAGCATGTA TAAAATGTTC CGCCTTCAGG GATCTGTTAT TACTGAAGAC
GAATTAACGA GTATAAAGTA CAGTGACTAT TCCGCAGTAT TTATTAAAAA AATGAATGCG
ACGGCTTTTC CGAATAGCGG CGTACAGATA TTTTTGTATG TAACCATACC TCCTGACAAA
TTGTTTACTG CTGACACATT GCGATACACC GTTGAAAAAG GAGCTACGAA AAACTATACC
GAAGATTTTT TCGGCAAATT TATTTTCTTC AGCAGCAACA ATGATGAAAC TGCTTTATCG
GAGCGTATTT TATTTACCGA TGAATCTGCC GGACCGGGTA CCGGAACAGA ATCACCTATC
TCTGCAGTAC CCAACTGGTC TACCAGAGGA GCAGGAAAAT ATAAAATCAA AGTACAGGTT
TCTGTATGTA ATCCATTAGA TTATTTTTAC GACAGTATTT ATGTAATCAT AACTGAAACT
CCTTGTCTTA GATTGGAAAT TAAAGATATG CCTTCGGTTT GCAGAGATGA AGTACTTGAT
TTAACACCAT ATGTATACCT GGATGGCCAC GCTGCAACAG CATCTGAACT TGCTCAAATG
ACATTCATCA ATAAAAGTTT ATTATCCGGC CCGGAAGAAA TCTTCGATCC GACAATGCTT
GATATGACAC AGATGGTTAA CAAAACAACC CGTTTTCCTC AGATTAAGAT CAACTATCAG
CCCAATGTTG ACTTAGGCAT CTGTACAGCT TTCACGTATG CGCCTGCATT AACAGTACCA
ACAAAGTTAA TTACAACAGA TCTCATTCTT ACAAAAAATA ATTACGGGAA TACGGTATAT
TATACCGTAG ATGGCGATTA TTACGGCTTC AATGATATGT TTGAAAAGAA TGTACTGAAA
AAACTGTATC TGGATAACTT TGCTGTGCAT AGTGGCACCC GACTTGATTT TTATACCGAT
GCCGCACTTG CAACACCGGT TATCGGAAAC AATTTAACTC CCGGCACTTA TTACATCGCA
GCTACTGATC CTGAGTGCGC CAATGACAGT ACAAAATTTA CAATAAATGT AAAAAATAAA
GCGTTCGACA TTTTCTGGAA AAGTGCGCCG GCACTTGGTA AAGGTTATTA TACATTCACA
GCCCCTGTTA CCGAAGGTGC AGCATATTCC TGGTTTGTCT GGGGAGGCTC TATTGTATCC
GGTTTAAATA CAAATGAAGT AACGGTATAT TATTCAGAGG ATGCAGCTCC TTCCGTATTG
GTTAGCTGTA CAATAACAGT AACACCTGCT AACACACGCA CAAATGCAGT AGGAACTGTT
ACCAGCTCTG CTGTGTATAT TACTTCTGAT CAAAATGGCG ATAAAGTAGA AATAACACCT
GAGCTTACCA CGCCAATCAT TTCAAGTGTA GCAAAAAGCT CTCTTACTGC CTATCCAAAT
CCTGCAAAAG AAACGTTCTC TTTATCAGGC TCTGGTGTGT ATGATGTAAA AATTTACAAT
ACGCTTGGGC AATTGGTTTT TGCAAACGCT TCTTATGAAG CAACTACACC AATTACTCTT
GAAAATAAAG GTCTGCATGT GGTTTATGTA ACACAGAAAG GTATTTCACA GGTGGTAAAA
GTTATTGCTG AATAA
|
|---|
| Protein sequence | MKKHLLAILS LLFISASLTA QTTNTYVVAD NGPYMMSCSD TLITLADIYE KTGIRDLNDP
NDNVSMYKMF RLQGSVITED ELTSIKYSDY SAVFIKKMNA TAFPNSGVQI FLYVTIPPDK
LFTADTLRYT VEKGATKNYT EDFFGKFIFF SSNNDETALS ERILFTDESA GPGTGTESPI
SAVPNWSTRG AGKYKIKVQV SVCNPLDYFY DSIYVIITET PCLRLEIKDM PSVCRDEVLD
LTPYVYLDGH AATASELAQM TFINKSLLSG PEEIFDPTML DMTQMVNKTT RFPQIKINYQ
PNVDLGICTA FTYAPALTVP TKLITTDLIL TKNNYGNTVY YTVDGDYYGF NDMFEKNVLK
KLYLDNFAVH SGTRLDFYTD AALATPVIGN NLTPGTYYIA ATDPECANDS TKFTINVKNK
AFDIFWKSAP ALGKGYYTFT APVTEGAAYS WFVWGGSIVS GLNTNEVTVY YSEDAAPSVL
VSCTITVTPA NTRTNAVGTV TSSAVYITSD QNGDKVEITP ELTTPIISSV AKSSLTAYPN
PAKETFSLSG SGVYDVKIYN TLGQLVFANA SYEATTPITL ENKGLHVVYV TQKGISQVVK
VIAE
|
|---|
| |