Gene CHU_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0257 
Symbol 
ID4184021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp311729 
End bp312904 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content39% 
IMG OID638070267 
Productsulfite reductase/membrane protein 
Protein accessionYP_676889 
Protein GI110636682 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.748657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCT GGCTGCACTT GTGGCTGGGT TTGATTTCAG GTACCATCAT GTTTATTGTT 
TGTATAACAG GGTGCATCTG GGTATTTCAG GAAGAGATAA CCGCATTAAC AGAACCATGG
AACAATATTA CTCCTGAAAA CAAACCTTTG CTGCTTCCAT CACAAGTAAA TCAAATTACC
GTGCAGCAAT TTCCGGGAAA AGAAATCCAT GGGTTTAATT ACTACGAAGG CAAAACTATC
TGTGTACATA TTTCACATGA AAAAGAATAC AACTACAATT TATTTCTTCA TCCCTATTCC
GGCAAAGTCT TACATATTGC CGATTACAAA AAAGACTCCT TTGATTTTTT CAGGTTTGTT
TTAAACGGCC ATCGTTTTTT ATGGCTGCCA TGGAAAATCG GAAGACCAAT TGTTAACTAT
GCCACACTTA CATTTGTTGT ATTACTCATT ACGGGTATCA TTTTATGGTG GCCAAAAAAT
AAATCAGCAG CTAAACAGCG TTTTTCATTT AAGTGGAAAG ATACTACTAA ATGGAAACGT
AAAAACTATG ACTTGCACAA TATTCTTGGT TTCTATGCCA TGATTTTTTT GTTACTCATC
GCATTAACCG GTATGCAGTG GGGCTTAAAA TGGTTTAACC ATTCACTACA CTGGATAGCT
TCCGGAGGAG AAACAAAACA CGATCGTGTT GAATTATTTT CTGATACGTT ACATATACCT
GCAAACGTTA CCGTTACAAC TAATTTAGAC AAGGCATGGT TAAAAGTATG GGCAGAGATA
CCCGATCCGT TAAATGTGTA TATGGATTAC CCGCATCATG ACGAAGCCGG CGGTACTATT
GCATTCTTCG TTACACCCAA AAAATTCGGT GGCTTTCAGT ATGAGCAATA CAACTTTGAT
CAGTATTCCG GAGAAGAAGT TCCGTCAAAA AAATCACTGA AATACAAAGA CGCGAAGGCA
GCAGACATTA TGGAACGCAT GTATTACGGC ATTCATGTTG GTGAAATATT GGGCTTGCCT
GGGAAATGTA TTGCATTTCT TGCAAGCTTA ACCGGTGCAT CGTTACCTGT AACCGGCGTA
TACATCTGGT TGGGCAGAAG AAAAAAAGAT AAACCGGAGA AAAATACCGC TTCAAAAATC
TTTCCGGAAA AAATACTGCT GCTACCGTTA AAATAA
 
Protein sequence
MIGWLHLWLG LISGTIMFIV CITGCIWVFQ EEITALTEPW NNITPENKPL LLPSQVNQIT 
VQQFPGKEIH GFNYYEGKTI CVHISHEKEY NYNLFLHPYS GKVLHIADYK KDSFDFFRFV
LNGHRFLWLP WKIGRPIVNY ATLTFVVLLI TGIILWWPKN KSAAKQRFSF KWKDTTKWKR
KNYDLHNILG FYAMIFLLLI ALTGMQWGLK WFNHSLHWIA SGGETKHDRV ELFSDTLHIP
ANVTVTTNLD KAWLKVWAEI PDPLNVYMDY PHHDEAGGTI AFFVTPKKFG GFQYEQYNFD
QYSGEEVPSK KSLKYKDAKA ADIMERMYYG IHVGEILGLP GKCIAFLASL TGASLPVTGV
YIWLGRRKKD KPEKNTASKI FPEKILLLPL K