Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0231 |
Symbol | |
ID | 4185532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 280969 |
End bp | 281724 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070241 |
Product | hypothetical protein |
Protein accession | YP_676863 |
Protein GI | 110636656 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.209293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.107963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAC AGGCATCCTT CTTTTTATTT ATATTATTTC TTTCTGCATG CACCATGCGC AATACAGATA TTGTAAGTGA TGATGCACTC AAAAATGACA GTCTTGTATC TGTTGTTACA ACCATTCATG ATACGCTGCC TCCGCCCTTC GATACTACCA GGTTTGACAA ACTTGCGGTT AGTTCTTTCT ATACAATCGG TATAAAAACG GGCGGAAAAA TATATTTTTC TCAAACCAAA GACAGTGTTT ATTCTGTAAT AACGAATGTT ATAAAAAATC ACGCCACACA GGATGCTGAT ATTGTTTTCT TAATTGACAA TACCGGAAGT ATGACAGACG ACATTGAGAA TGTTAAGAAA AATTTAAACA AACTGATTGA CCTGTTAAAA ACGCTACAGC ATGTAAGGGT TGCAGTAGCA CTGTACGGCG ACAAGAATAG TGATGGTAGT GCTTGGTATA AGCGAACAGA GTTAACCCCT GACCTGGAAA CAACAAGAAA ATTTATTCAT TCAATATATG TAAACGGTGG CGGCGACACG CCTGAATCAG CCTACGATGC CTTGTATAAA ACCACGAACG AATTGAAATG GAAATCCAGC AGCAAACGGA TGATTTTATT AATTGGCGAT GCTCCAGGCC TGGAACCTCC TTTAACCGAA CATAACCGGG AAGAGGTAAT TAAAAACTGT TTGAAAAACG ATATTAAAGC AAACGTATTT CCTGTTCTTA TTGATACAGG GCTATTACCG TTATAA
|
Protein sequence | MKKQASFFLF ILFLSACTMR NTDIVSDDAL KNDSLVSVVT TIHDTLPPPF DTTRFDKLAV SSFYTIGIKT GGKIYFSQTK DSVYSVITNV IKNHATQDAD IVFLIDNTGS MTDDIENVKK NLNKLIDLLK TLQHVRVAVA LYGDKNSDGS AWYKRTELTP DLETTRKFIH SIYVNGGGDT PESAYDALYK TTNELKWKSS SKRMILLIGD APGLEPPLTE HNREEVIKNC LKNDIKANVF PVLIDTGLLP L
|
| |