Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0230 |
Symbol | |
ID | 4185531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 280183 |
End bp | 280716 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638070240 |
Product | two-component sensor histidine kinase/response regulator |
Protein accession | YP_676862 |
Protein GI | 110636655 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.949413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.193124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGCTA TCACTTTTGA TAACGCTGGC AATGGCTGGT TTGGAACAAA TTACGGAATT TCAAAATTTG ATGGCACTTC AACGTGGTCA GAATATAATG AAATGAATTT GTCACTCATC GGATATAATT ACCAAACAAT AAAATCAATT GCTGTTGAAT CCAATGGAAC AAAATGGTTT GGTGCAAATT CAGGTGCGGG AGTATACATA TTTAATGATG TGGATTGGAC GTATCTAAAC TCAAATAATA GCGGATTAAA AACCTCAGGT TATGTAACGT CTATCGTTAC TGACTCAAAA GGAATTGTAT GGTTAGGTTT AAATTTTGGT GGAGTTGCTA AATATGACGG AAAAACTGTG ACTACCTATA CAGCACTCAA TAGTAATCTT GTTTCATCCA ATGTAACGTC TTTATGTTTT GACTCTGAAG AAAATTTATG GGTAGCAACA CAAGGTGGTA TCAGCAAATT TGATGGTACA AACTGGACTA CTTATTTATC AGGACAATTA ATCAATGCTG TTACGGTAGA ATAA
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Protein sequence | MFAITFDNAG NGWFGTNYGI SKFDGTSTWS EYNEMNLSLI GYNYQTIKSI AVESNGTKWF GANSGAGVYI FNDVDWTYLN SNNSGLKTSG YVTSIVTDSK GIVWLGLNFG GVAKYDGKTV TTYTALNSNL VSSNVTSLCF DSEENLWVAT QGGISKFDGT NWTTYLSGQL INAVTVE
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