Gene CHU_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0229 
Symbol 
ID4185530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp279265 
End bp280002 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content42% 
IMG OID638070239 
Producthypothetical protein 
Protein accessionYP_676861 
Protein GI110636654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.977312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.106248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGA CTGGATTACT GGATGCATAT GGAACAGAAG AAAAAGAAGC CTACATAGGC 
GTTATTGCTT CTATAGCAAC AGCAGACCGC GTTGCCACGG AAGACGAACT GGAATATCTT
AACGCCTTAT CTGAAGCAGT TGGTATTAAC CCTGATGTTG CAGAAGCGGC AGCAAAAGAT
CGTTCCGATG AATCATTGTC AAAATATTTG AATGCATTAA AAGGCAGTGA TCTGCGCTTT
TCACTCATTA CGGATATTGT CAGCTTTGCC CGATCAGATG GGCGATATAC AGCCGATGAA
GAAGAAAAAA TAAAAAACAG CTGCCGGTAC TTGGGTATTA CAGATGAACA AGTAACTGTG
CTGGAAGAAT TGGTAGAAAA AAGTAACATT CTTATTACCA TTCCTGAAGA AGCAACGGAT
GAAGGTTTTT TTGAAAAAAA TGGTTTTTCG CAAATGCTTA AAAAAGCAAA TATTCCGCTT
ATCAGTATAG TGAAAGGCTT GCTTGGTCTG GCAGCTCCTT TTGTTCTTTC TAAAATGGTT
CGCAGCAGAT CTCTTTCCGG AAGTCCTGCA GCAGGCGGTT TAGGCGGTCA GCTGGGCGGC
ACGGTGCTAG GCACATTTCA GGCAGGACGT ATTGGGGGCT TAGGCTCAAT ACTGGCAAAC
CTGAATGGAA TCAGAGGATA TGCAGATATC GGAACGATCC TTAAAAAAGC GATTGATAAA
AAAGAAATCA ATAGTTGA
 
Protein sequence
MNETGLLDAY GTEEKEAYIG VIASIATADR VATEDELEYL NALSEAVGIN PDVAEAAAKD 
RSDESLSKYL NALKGSDLRF SLITDIVSFA RSDGRYTADE EEKIKNSCRY LGITDEQVTV
LEELVEKSNI LITIPEEATD EGFFEKNGFS QMLKKANIPL ISIVKGLLGL AAPFVLSKMV
RSRSLSGSPA AGGLGGQLGG TVLGTFQAGR IGGLGSILAN LNGIRGYADI GTILKKAIDK
KEINS