| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0207 |
|---|
| Symbol | ilvA |
|---|
| ID | 4185312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 252291 |
|---|
| End bp | 253544 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638070216 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_676839 |
|---|
| Protein GI | 110636632 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR02079] threonine dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.743281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGTA AAGTGAAGGT TGAAGACATT GTTGAAGCGG CAAACCGTTT GAAAAATGTT
GTGACGCATA CGCCATTAAC CAAAAATGAG CATCTTTCTC AGGAATATAA CTGCAACCTA
TGGTTAAAAA GGGAAGATCT GCAATTGGTT CGTTCCTATA AACTTCGTGG AGCATATAAT
TTTATGTGCA GTCAAAAACG CGAAGATATA GAAAAGGGTG TTGTATGTGC CAGTGCCGGA
AACCATGCTC AGGGCGTTGC CTATTCCTGC CAGGCGTTGA AAATTAAAGG CCGGATCTAT
ATGCCGAGCA CAACACCCAA ACAAAAAGTT ACGCAGGTAA AATTTTTTGG TAAAGAGTTT
GTTGAAGTTG TTCTGACCGG CGATACGTTT GATGATTCGT ACAAAGAGGC AATGAATTAT
TGCACAGAGA ATAAATTATT ATTTGTACAT CCGTTCGATG ATCCTAAAGT AATAGCCGGG
CAAGGTACAG TAGGTTTTGA AATATTAAAT GATATTGTTG GAACCATTGA TTATATCTTT
GTGCCGATTG GCGGCGGCGG GCTTGCAGCA GGACTTTGTA CCTACATAAA AGAATTGAGC
CCGCATACAA AAATCATTGG GGTGGAGCCG TTAGGTGCGC CGGCAATGAA ACGCTCACTG
GAAGAAGGGA AAGTTGTTGT ACTGGAAGAA ATCGATAAGT TTGTGGATGG TGCTGCCGTG
AAGCGGGTAG GCGATCTCAA TTTTGATATC TGTTCAGAAT ATCTAGATGA TGTACAGTTG
GTACCGGAAG GGAAAACATG CAGCACGATC ATAAAGCTGT ATAATGAAGA AGCCATTGTA
GCAGAACCTG CAGGGGCATT AAGCATTAGT GTGCTGGATT ATTATAAAGA TGAAATAAAA
GGGAAGAATG TTGTGTGTGT GATCAGCGGC AGTAACAACG ATATCGACCG CATGCAGGAG
ATCAAGGAAC GGTCGTTGTT GTATGAAGGG CTGAAACATT ATTTCATAAT CCGCTTTAAG
CAGCGTACAG GAGCACTCAG AGAGTTTCTG GATGAGGTTT TAGGGCCAAA TGATGATATT
ACCTATTTTG AATATACAAA GAAAACAAAC CGTGAAAATG GCCCGGCAAT GGTTGGTATT
GAGGTTAAAA TGAAAGAAGA TTTTAATTTA CTCATCGACC GTATGAACGC AAAAAATGTC
GACTATACGT TAGTAAATTC AGATTCAAAC TTATTTAGTT TTCTGATCAT GTAA
|
|---|
| Protein sequence | MNSKVKVEDI VEAANRLKNV VTHTPLTKNE HLSQEYNCNL WLKREDLQLV RSYKLRGAYN
FMCSQKREDI EKGVVCASAG NHAQGVAYSC QALKIKGRIY MPSTTPKQKV TQVKFFGKEF
VEVVLTGDTF DDSYKEAMNY CTENKLLFVH PFDDPKVIAG QGTVGFEILN DIVGTIDYIF
VPIGGGGLAA GLCTYIKELS PHTKIIGVEP LGAPAMKRSL EEGKVVVLEE IDKFVDGAAV
KRVGDLNFDI CSEYLDDVQL VPEGKTCSTI IKLYNEEAIV AEPAGALSIS VLDYYKDEIK
GKNVVCVISG SNNDIDRMQE IKERSLLYEG LKHYFIIRFK QRTGALREFL DEVLGPNDDI
TYFEYTKKTN RENGPAMVGI EVKMKEDFNL LIDRMNAKNV DYTLVNSDSN LFSFLIM
|
|---|
| |