Gene CHU_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0192 
Symbol 
ID4185571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp235031 
End bp237352 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content37% 
IMG OID638070201 
Productpeptidyl-prolyl cis-trans isomerase 
Protein accessionYP_676824 
Protein GI110636617 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.047177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT CCTTTTGGAT TATTGCATCT GCCCTATCCG GGTTATTTGT TTATAGTTGT 
GTAAGTGACA AAACCGCAAC TTCCTCTTCT AAAAAATCAA CCGCACCTGC AGCATCACCG
GCCATACTAA CCGTAGCTGA TGATTCCATT TCAACAGAAG ATTTTAAATA CATCTACGAT
AAAAATAATG GAAAAAGTGC GGATGCCTAT TCCAGACAAA GCATTGAGGA ATACATTGAT
CTGTATACCA AATTCAAACT TCGCGTTAAA GAAGCTGAAT CTCTCGGACT AGATACAACC
GCTGCATTTA AACAGGAGTT AGCTGGTTAT CAAAAACAAT TAGCGCAACC TTATTTAACA
GAAAAAGGCG TTACAGACAT GCTTGTTAAA CAAGCATATG AACGCATGAA AGAAGAGATT
CGTGCAAGTC ATATCTTAAT ATTCTGTAAT CCTGAAGCTA CCCCTAAAGA CACGCTTATT
GCGTACAACA AAATTGTTGC GCTTAGAGAG CGTGCATTAA AAGGCGAAAA TTTTGACCAG
TTAGCTGCTC AATATTCAGA AGATCCATCT GCGAAAACCA ACAAAGGTGA TCTGGGATAT
TTTACTGCAC TATCCATGGT ATATGAATTT GAAGAAGCTG CTTATAATAC AAAAGTAGGC
AGCGTTTCTA AACCTGTCCG TACGAAATTT GGCTACCACA TTCTAAAAGT TGTAGACAGA
CGGCCTTCTC AGGGACAGAT TCATGTTGCA CACATTATGG CGCGCTACAG CCAGGGCATG
AGTGCGGAAG ATTCAATTCT TGCAAAAAAT AAAATTGATC AGATCTATAA AGAACTTCAG
GCAGGAACTT CCTGGAATGA ATTGTGCGGT GAATTTTCGG ACGATGTAAA TTCAAGAAGT
AAAAACGGTG AATTACAATG GTTCTCTACA GGTAAAATGA TTCCTTCTTT TGAGAATGCA
GCGTTCACAC TAACAACACC GGGGCAATAC ACAACGCCTG TACAAACTCC GTATGGCTGG
CATATCATAA AACTCCTTGA ACGTAAACCA TTAGGTTCGT TTGAAGAACT GGAACCAAGC
ATCCGTGCAA AGGTTACAAA AGATTCCCGT TCAGATTTAA ATAAAAAAAT GCTGATTGCA
CGTTTAAAGC GTGAAAACAA TTTTGTTGAG TACACCAAAG GTATTGATTA CGCTGTTTCT
AAAGCAGATA GTAGCTTGTT AATAGGTAAC TGGACATTTA AAGAAAGTGA AAAAAATAAA
GCAACGTTAT TTACAATCAA TAAAGAAAAA TATACAGCAG AAGACTTTTT CGCATTTGTA
TATGAAAACC AGCATGCCGT AAAAAATACT TCGCCTGAGG TATACATGAA AAATGTTCTG
TATACGGACT TTGTTAACTC AAGTATTATG GGCTATGAAG AAGCTCACCT GGCTGATAAA
TTTGTAGATT ACAAAATGCT GTTAAAAGAA TATCACGATG GTATTCTTTT ATTCCAGATG
ATGGAAGAAA AAGTTTGGAA CAAAGCTTCT TCTGATACTG CCGGTCTTAG AAGATTCTAT
CAGGACAATG CTTCTAAATA TGCCTGGGGT GATCGTGCGC ACGCATACAT CTTAAGCGCA
GCAGACAAAA CAACATTGGA TAAAGTAGCG GTTGATTTTA AATCTGTATC TTACCAGGTT
AAAGAACAAT CGTTTGAAAA TATCAGTTTT GAAAAAAATA GCGCATCTGT AAATAAGGCT
GGCAAAAGCC AATTAGACCG TGCGATTATT TTATTAAGAA AGGATGCGAA TTACAGCACA
TCAATTAAAT TGAGCAGAGA TCACGCTGAA AACGCTGCTG TTTCTGCACA CCGTAAAGAT
TCAATTCTGG CTTATTTTAC AAAAGCAGGT ATAAAAAAAG AACGTATATC TTTTATTGAT
CTTAAAACAC CGCCAGTAAG AAAAACAGAA GCGCAACGCC AGGCTGATCG TTTCGCTGAA
ATTCAATTAT TTACTTCTTC TAAAAAATAT CTGGAAAGTG TCTACAACGC TAAAACGCCG
CTTACACTTC AGGTTTCTGA AGGAATGTAT GTAAAAAATG AAAATGAACT GATTAATAAA
TGTTCATGGG CAGTAGGCGA ATATAGATTT GAACAAAATA ACCGCGCTTA TTTAATCATT
ATAGATCGTG TAGATGCACC AAGAAATAAG ACATTTGAAG AAGCGAGAGG AATGGTTATT
TCAGACTATC AAGCCTATTT AGAACAACAG TGGATTGCTG AATTAAGACA GAAATATCCA
ACAAAAGTCA ATCAGACAGA AGTTCAGAAA CTTATCAAAT AA
 
Protein sequence
MKLSFWIIAS ALSGLFVYSC VSDKTATSSS KKSTAPAASP AILTVADDSI STEDFKYIYD 
KNNGKSADAY SRQSIEEYID LYTKFKLRVK EAESLGLDTT AAFKQELAGY QKQLAQPYLT
EKGVTDMLVK QAYERMKEEI RASHILIFCN PEATPKDTLI AYNKIVALRE RALKGENFDQ
LAAQYSEDPS AKTNKGDLGY FTALSMVYEF EEAAYNTKVG SVSKPVRTKF GYHILKVVDR
RPSQGQIHVA HIMARYSQGM SAEDSILAKN KIDQIYKELQ AGTSWNELCG EFSDDVNSRS
KNGELQWFST GKMIPSFENA AFTLTTPGQY TTPVQTPYGW HIIKLLERKP LGSFEELEPS
IRAKVTKDSR SDLNKKMLIA RLKRENNFVE YTKGIDYAVS KADSSLLIGN WTFKESEKNK
ATLFTINKEK YTAEDFFAFV YENQHAVKNT SPEVYMKNVL YTDFVNSSIM GYEEAHLADK
FVDYKMLLKE YHDGILLFQM MEEKVWNKAS SDTAGLRRFY QDNASKYAWG DRAHAYILSA
ADKTTLDKVA VDFKSVSYQV KEQSFENISF EKNSASVNKA GKSQLDRAII LLRKDANYST
SIKLSRDHAE NAAVSAHRKD SILAYFTKAG IKKERISFID LKTPPVRKTE AQRQADRFAE
IQLFTSSKKY LESVYNAKTP LTLQVSEGMY VKNENELINK CSWAVGEYRF EQNNRAYLII
IDRVDAPRNK TFEEARGMVI SDYQAYLEQQ WIAELRQKYP TKVNQTEVQK LIK