Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0192 |
Symbol | |
ID | 4185571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 235031 |
End bp | 237352 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070201 |
Product | peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_676824 |
Protein GI | 110636617 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.047177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAT CCTTTTGGAT TATTGCATCT GCCCTATCCG GGTTATTTGT TTATAGTTGT GTAAGTGACA AAACCGCAAC TTCCTCTTCT AAAAAATCAA CCGCACCTGC AGCATCACCG GCCATACTAA CCGTAGCTGA TGATTCCATT TCAACAGAAG ATTTTAAATA CATCTACGAT AAAAATAATG GAAAAAGTGC GGATGCCTAT TCCAGACAAA GCATTGAGGA ATACATTGAT CTGTATACCA AATTCAAACT TCGCGTTAAA GAAGCTGAAT CTCTCGGACT AGATACAACC GCTGCATTTA AACAGGAGTT AGCTGGTTAT CAAAAACAAT TAGCGCAACC TTATTTAACA GAAAAAGGCG TTACAGACAT GCTTGTTAAA CAAGCATATG AACGCATGAA AGAAGAGATT CGTGCAAGTC ATATCTTAAT ATTCTGTAAT CCTGAAGCTA CCCCTAAAGA CACGCTTATT GCGTACAACA AAATTGTTGC GCTTAGAGAG CGTGCATTAA AAGGCGAAAA TTTTGACCAG TTAGCTGCTC AATATTCAGA AGATCCATCT GCGAAAACCA ACAAAGGTGA TCTGGGATAT TTTACTGCAC TATCCATGGT ATATGAATTT GAAGAAGCTG CTTATAATAC AAAAGTAGGC AGCGTTTCTA AACCTGTCCG TACGAAATTT GGCTACCACA TTCTAAAAGT TGTAGACAGA CGGCCTTCTC AGGGACAGAT TCATGTTGCA CACATTATGG CGCGCTACAG CCAGGGCATG AGTGCGGAAG ATTCAATTCT TGCAAAAAAT AAAATTGATC AGATCTATAA AGAACTTCAG GCAGGAACTT CCTGGAATGA ATTGTGCGGT GAATTTTCGG ACGATGTAAA TTCAAGAAGT AAAAACGGTG AATTACAATG GTTCTCTACA GGTAAAATGA TTCCTTCTTT TGAGAATGCA GCGTTCACAC TAACAACACC GGGGCAATAC ACAACGCCTG TACAAACTCC GTATGGCTGG CATATCATAA AACTCCTTGA ACGTAAACCA TTAGGTTCGT TTGAAGAACT GGAACCAAGC ATCCGTGCAA AGGTTACAAA AGATTCCCGT TCAGATTTAA ATAAAAAAAT GCTGATTGCA CGTTTAAAGC GTGAAAACAA TTTTGTTGAG TACACCAAAG GTATTGATTA CGCTGTTTCT AAAGCAGATA GTAGCTTGTT AATAGGTAAC TGGACATTTA AAGAAAGTGA AAAAAATAAA GCAACGTTAT TTACAATCAA TAAAGAAAAA TATACAGCAG AAGACTTTTT CGCATTTGTA TATGAAAACC AGCATGCCGT AAAAAATACT TCGCCTGAGG TATACATGAA AAATGTTCTG TATACGGACT TTGTTAACTC AAGTATTATG GGCTATGAAG AAGCTCACCT GGCTGATAAA TTTGTAGATT ACAAAATGCT GTTAAAAGAA TATCACGATG GTATTCTTTT ATTCCAGATG ATGGAAGAAA AAGTTTGGAA CAAAGCTTCT TCTGATACTG CCGGTCTTAG AAGATTCTAT CAGGACAATG CTTCTAAATA TGCCTGGGGT GATCGTGCGC ACGCATACAT CTTAAGCGCA GCAGACAAAA CAACATTGGA TAAAGTAGCG GTTGATTTTA AATCTGTATC TTACCAGGTT AAAGAACAAT CGTTTGAAAA TATCAGTTTT GAAAAAAATA GCGCATCTGT AAATAAGGCT GGCAAAAGCC AATTAGACCG TGCGATTATT TTATTAAGAA AGGATGCGAA TTACAGCACA TCAATTAAAT TGAGCAGAGA TCACGCTGAA AACGCTGCTG TTTCTGCACA CCGTAAAGAT TCAATTCTGG CTTATTTTAC AAAAGCAGGT ATAAAAAAAG AACGTATATC TTTTATTGAT CTTAAAACAC CGCCAGTAAG AAAAACAGAA GCGCAACGCC AGGCTGATCG TTTCGCTGAA ATTCAATTAT TTACTTCTTC TAAAAAATAT CTGGAAAGTG TCTACAACGC TAAAACGCCG CTTACACTTC AGGTTTCTGA AGGAATGTAT GTAAAAAATG AAAATGAACT GATTAATAAA TGTTCATGGG CAGTAGGCGA ATATAGATTT GAACAAAATA ACCGCGCTTA TTTAATCATT ATAGATCGTG TAGATGCACC AAGAAATAAG ACATTTGAAG AAGCGAGAGG AATGGTTATT TCAGACTATC AAGCCTATTT AGAACAACAG TGGATTGCTG AATTAAGACA GAAATATCCA ACAAAAGTCA ATCAGACAGA AGTTCAGAAA CTTATCAAAT AA
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Protein sequence | MKLSFWIIAS ALSGLFVYSC VSDKTATSSS KKSTAPAASP AILTVADDSI STEDFKYIYD KNNGKSADAY SRQSIEEYID LYTKFKLRVK EAESLGLDTT AAFKQELAGY QKQLAQPYLT EKGVTDMLVK QAYERMKEEI RASHILIFCN PEATPKDTLI AYNKIVALRE RALKGENFDQ LAAQYSEDPS AKTNKGDLGY FTALSMVYEF EEAAYNTKVG SVSKPVRTKF GYHILKVVDR RPSQGQIHVA HIMARYSQGM SAEDSILAKN KIDQIYKELQ AGTSWNELCG EFSDDVNSRS KNGELQWFST GKMIPSFENA AFTLTTPGQY TTPVQTPYGW HIIKLLERKP LGSFEELEPS IRAKVTKDSR SDLNKKMLIA RLKRENNFVE YTKGIDYAVS KADSSLLIGN WTFKESEKNK ATLFTINKEK YTAEDFFAFV YENQHAVKNT SPEVYMKNVL YTDFVNSSIM GYEEAHLADK FVDYKMLLKE YHDGILLFQM MEEKVWNKAS SDTAGLRRFY QDNASKYAWG DRAHAYILSA ADKTTLDKVA VDFKSVSYQV KEQSFENISF EKNSASVNKA GKSQLDRAII LLRKDANYST SIKLSRDHAE NAAVSAHRKD SILAYFTKAG IKKERISFID LKTPPVRKTE AQRQADRFAE IQLFTSSKKY LESVYNAKTP LTLQVSEGMY VKNENELINK CSWAVGEYRF EQNNRAYLII IDRVDAPRNK TFEEARGMVI SDYQAYLEQQ WIAELRQKYP TKVNQTEVQK LIK
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