Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0191 |
Symbol | surA |
ID | 4185570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 233545 |
End bp | 234903 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070200 |
Product | peptidyl-prolyl cis-trans isomerase (survival protein) |
Protein accession | YP_676823 |
Protein GI | 110636616 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0672065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCATTAT ACATGCTTTT AAGATACCTT TTCGTTTTCT TCGTATTTGT TACGAATTAC CATTTCTGTG CTGCACAGCA GGTAATAGAT AAAATCGTTG CCAAAGTCGA CAATCAAATT GTTCTCAAAT CCGAAGTAGA GATTTCATAC CTGCAATTCA TGCGTAGCCC TGAAGCTCAA ATGATGCAAA CAACGGATGA TATTAAATGC CGTGTATTGG AATCACTGAT TATTAACAAG ATGTTGCTGG CAAGAGCCGT GATGGATTCT GTAACGGTTG AAAGGGAAAT TATCAATCAG CAGATTGACC GCAGAATGGA TTATTTCATT CAGCAGTTCG GAACAGTTGC TAAACTTGAA AGCTATTATA ACAAAAGCAT AGACCAGCTT AAAGAGGAAT TATACCCTCA GATCAGAGAC CAGATGGTAA CACAAAAAAT GCAGGATAAT ATTACTGCCG GTGTAACAAT CACTCCGAAT GATGTGAAAA AATTTTACAA AGCTTTACCG GCAGATTCGC TTCCGTATTT TTCTTCTGAA GTAGAAGTTG GACAGATTAT CCGTTTGCCT GAAATTAATC GTCAGGATCA ATTAAAGTTT AAACAAAAAC TTGAAGAGAT CCGCCAGCGT GTAGCTTCCG GTGAAGATTT CTGTCGTCTC GCAAAACAAT TTTCTCAGGA TCCTGTATCG GCAAAAAACT GCGGAGAAAT CGGTTTCTTT AAAAAAGGTG AACTTGTGCC CGAATACGAA GCTGCGGCAA GCAAGCTCCA GCCTGGCCAA ACATCAGGTG TTATTGAAAC GCAATACGGC TACCACATTG TACAGTTGAT TGAACGCAGA GGGGCTGAAT ACAATACACG CCATATCCTG ATTAAGCCGG CGTCTTCTTC AAAAGATCTG ATATACCCAA CATTGTTTCT TGATTCACTT CGCTTAGAGA TTTTAAAAGA CAGTATCTCA TTTGCGAAAG CTGCAAAAAA TTATTCTTCC GACAAACAAA CAGCCTTTAA TGGAGGCATG CTTTCCGATC CGGAATCTGG TAGTTCGAGA ATCGCGCAGG AAGATCTTCC GCCTGCCATT TTCTTTGTAA TTGACACAAT GAAAATCGGT GAAATATCTA TGCCCGCTAA ATTTACAATG GAAGATGGTA CGGAAGCCGT TCGGATTGTT TATTTTAAAA ATAAAATTCC TGCCCATCAA GCCAACCTGA AAGATGATTA CCAGAAAATC TATTCAGCTG CCTTAGAAGA AAAGAAAAAT AATGCCGTAA ACGAATGGTT TGATAAAACA AAATCTCAAG TCTATATTGA TATTGATGAT GAGTACAAAC AATGTGAAAT CATGATTATT CAAAAATAA
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Protein sequence | MPLYMLLRYL FVFFVFVTNY HFCAAQQVID KIVAKVDNQI VLKSEVEISY LQFMRSPEAQ MMQTTDDIKC RVLESLIINK MLLARAVMDS VTVEREIINQ QIDRRMDYFI QQFGTVAKLE SYYNKSIDQL KEELYPQIRD QMVTQKMQDN ITAGVTITPN DVKKFYKALP ADSLPYFSSE VEVGQIIRLP EINRQDQLKF KQKLEEIRQR VASGEDFCRL AKQFSQDPVS AKNCGEIGFF KKGELVPEYE AAASKLQPGQ TSGVIETQYG YHIVQLIERR GAEYNTRHIL IKPASSSKDL IYPTLFLDSL RLEILKDSIS FAKAAKNYSS DKQTAFNGGM LSDPESGSSR IAQEDLPPAI FFVIDTMKIG EISMPAKFTM EDGTEAVRIV YFKNKIPAHQ ANLKDDYQKI YSAALEEKKN NAVNEWFDKT KSQVYIDIDD EYKQCEIMII QK
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