| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0187 |
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| Symbol | ompA |
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| ID | 4185566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 230925 |
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| End bp | 231644 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070196 |
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| Product | peptidoglycan-associated outer membrane protein |
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| Protein accession | YP_676819 |
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| Protein GI | 110636612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.281065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTAAAA AAATGCTTGC AGTGGTTTTT TTTACCACGT TATTCAGTCT GAGGCTTACT
TATAGCCAAA CCGTTAATAC ATTACGCGAA ACAGAAGATT CTGTGCTGGT AACCTTTATT
ATTACCGATT TAGATAGTGT GCCTATTGAG CATGCCAAGC TGCGGGTTAG CGCAACGGAC
AGATCTTTAA CGAAAGAAGG GGTTAGTGAT GTACTGGGTA TGTGTTATAT GCTTTTGCCT
GAAGGCAAGA CGTATACCAT GGTTGTACAT AAATACCGGA CAGATTTTCC CTTTAACGGA
GGCTTGGTCT TGCCTGTAGA AAAAGGGCGT TACTCGTTTG ATCAGGAAAT CCGCATAAAG
CTGATCAGGG ATTATGCACG GATTTTTACA CTAGACAATG TGTATTTTGA TGTAAACAAA
TGGAACATAA AACCCGAGTG TGAACCTGCC ATAGATAATC TGTATAACAG TTTAACACTA
AATCCAAACA TGCATATAGA AATTGCTGGA CATACCGACA GCGACGGAGA TGCACATGAT
AACCTGGTCT TATCTCAGCG CAGAGCGGAG GCAGTGATGA ATCATTTAAT TCAAAAAGGT
TTAGATCCGA AACGGGTGCA GGCAAAAGGC TATGGGGAAT ACAAACCAAT CGCACCCAAT
GACAGTCCTC AAAATAAATA CAGAAACAGA AGAACAGAGG TGCGCGTGTT AGATGAATAG
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| Protein sequence | MLKKMLAVVF FTTLFSLRLT YSQTVNTLRE TEDSVLVTFI ITDLDSVPIE HAKLRVSATD
RSLTKEGVSD VLGMCYMLLP EGKTYTMVVH KYRTDFPFNG GLVLPVEKGR YSFDQEIRIK
LIRDYARIFT LDNVYFDVNK WNIKPECEPA IDNLYNSLTL NPNMHIEIAG HTDSDGDAHD
NLVLSQRRAE AVMNHLIQKG LDPKRVQAKG YGEYKPIAPN DSPQNKYRNR RTEVRVLDE
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