| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0176 |
|---|
| Symbol | |
|---|
| ID | 4183569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 218347 |
|---|
| End bp | 220635 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 762 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638070185 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_676808 |
|---|
| Protein GI | 110636601 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.368405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA AAATTATTCG TGCAGCAATT TTAGTGCTTT GGTGCAGCTT TATATCAGGT
GCAGCATTTA TTTGGTTGTG GTTTTATATG GTCTCAAACA ATACAGGAGA CCTGTTTGGA
CCTATGCCAA ATCTGGAAGC ATTAGAAAAT CCCAAATCAA ACATCTCTTC TGAATTGTAT
ACATCGGACG GTGTACTTAT CGGAAAATAT TACAGGGAAA ACAGAACGAA TATTTCATAC
AATGAAATAT CTCCGAATGT AATAAACGCC TTGGTTGCAA CCGAAGATAT TCGTTTTGAA
AAACATTCAG GCATTGATTT GCAGGGAAGC TTTGCAATTT TTTGGTATTT ATTGAAAGGT
GATAAAAGAG GATCGAGTAC GATATCCCAA CAGCTCTCAA AAAATCTTTT TAAAACGCGT
GGCGCCAAAT ATGAAGGCAG CCTGGCTAAA AAAAACAATA AACTGCGATT AGTAATTAAT
AAAACGAAGG AATGGATCTC GGCCATTCAA ATCGAACGGT CCTACACCAA AAAAGAGATC
ATGACTATGT ATCTCAACAC GGTGGATTTT GGAAGTAATT CATTTGGTAT TGTAACAGCA
TCACAAACCT TCTTCAGTAT TCCCCAGGAT AGCCTAAACA TCAATCAGGC TGCAATGCTG
GTAGGCTTAC TGAAAGCCCC GTCTTTGTAC AGCCCTGTAT ACAATCCTGA AAATGCTATC
GCGCGTAGAA ATACTGTTTT AGAACAACTT AATAAATATA AATACATAAG TGATGCCCAG
TTTGCAACAT TGTCGGCGCA GCCTATTGCA CTCAAATATG AAGTTGAAAA TCATAATAAA
GGTTCTGCAA CCTATTTCAG AAGTTATATT ACCAGGTATT TAATCAGTTG GTGTAACGAA
CGGGGCATTG ATTTGTATGA AGACGGTATT AAAATCTACA CCACCATTGA TTCTAAAATT
CAGGCTTATG CTGAAGCTTC AGTCTCAGAA CATATGAAAT ATCTTCAAGG TAAATTCTTT
GCCTACTGGA AAGGTAAAAC TCCTTGGCGC GATGAAGAAT TTAAAGAAAT TCCAAACTTT
ATTGAAAAAG CTGCCAGACA TTCTGATCGA TGGAGAATGT TTTCTGAAAT TTATGATGGA
GATACAGCGA AAGTTTGGAG TGCGATGAAT AGAAAAATTT CCATGAAAGT ATTTAGCTGG
AATGGTGAAA TTGATACATT GCTGAGCCCG ATTGATTCTA TCAGATATTA TAAGCATTTT
CTTCATGCCG GTATGTTATC GATGGATCCG CATAGTGGCC AGATTAAAGC CTGGGTGGGT
GGAATTGATC ACAAACATTT TAAATACGAT CATGTAAAAC AAGGATCGAG ACAACCCGGC
TCTACGTTCA AGCCTTTTGT CTATACTGCC GCTATTGATC TTGGTTACAG CCCTTGTTAT
GAATTGCCCG ATTTGCCGGT TACATTCAAA ACAGAAGATA TTAATGAAAC ATGGACACCA
CAAAACAGCG ATGGCGCTTA TAGCGGAGAA ATGTTTTCAA TACGAAAAGC GATGGCCAAT
TCCATCAATA GCATTACAGC CAATCTGATT AAAAAAGTTG GTCCTGAAAC AGTAGTTGAT
TATGCTACTC GTATGGGCAT CACAACCCCA CTGGAACCCG TGCCGGCTCT ATGCTTAGGT
GTGTTTGATG TAACCTTATA CGATATGGTT GGCGCATATA GTACGTTTGT AAATCAAGGC
GTATGGACTG AGCCGATATT TATTACACGC ATCGAAGATA AAAACGGTAA TATTCTCCAG
AATTTTGTAC CTAAAACAAA AGAAGTTCTA AGTGAAGAGA CAGCCTACTT AATGGTACAT
ATGCTTAAAG GGGCAACGGA AGAAAAAGGA GGTACTGCAT TAGGCTTAAA TAAATATGGC
CTTTTATGGA ACGGAGCAGA AATCGGAGGC AAAACCGGTA CAACGCAGAA TTATTCTGAT
GGCTGGTTTG TTGGAATAAC AACGCAATTA ACCACTGGCA TCTGGGTTGG AGGAGACGAC
CGCTCTATCC ACTTCAGAAG CATGAATGAC GGTCAAGGTG CCAGAATGGC GATGCCGATC
TGGGCAATCT TTATGAACCA TCTTTATAAT GATCCTAAAA CCGGCATTCT GAAAGAACGT
TTTCCGACAC CTGCATCTCC ATTATCTGTT GAAATAAATT GCAAAAAATT TAAAGAGGTA
GAAAATGCTA ATAGTAATAC AAATCCCAAC AGTTCAGTAA TTAAAAATCA AAATATTCCA
GATTTTTAA
|
|---|
| Protein sequence | MKVKIIRAAI LVLWCSFISG AAFIWLWFYM VSNNTGDLFG PMPNLEALEN PKSNISSELY
TSDGVLIGKY YRENRTNISY NEISPNVINA LVATEDIRFE KHSGIDLQGS FAIFWYLLKG
DKRGSSTISQ QLSKNLFKTR GAKYEGSLAK KNNKLRLVIN KTKEWISAIQ IERSYTKKEI
MTMYLNTVDF GSNSFGIVTA SQTFFSIPQD SLNINQAAML VGLLKAPSLY SPVYNPENAI
ARRNTVLEQL NKYKYISDAQ FATLSAQPIA LKYEVENHNK GSATYFRSYI TRYLISWCNE
RGIDLYEDGI KIYTTIDSKI QAYAEASVSE HMKYLQGKFF AYWKGKTPWR DEEFKEIPNF
IEKAARHSDR WRMFSEIYDG DTAKVWSAMN RKISMKVFSW NGEIDTLLSP IDSIRYYKHF
LHAGMLSMDP HSGQIKAWVG GIDHKHFKYD HVKQGSRQPG STFKPFVYTA AIDLGYSPCY
ELPDLPVTFK TEDINETWTP QNSDGAYSGE MFSIRKAMAN SINSITANLI KKVGPETVVD
YATRMGITTP LEPVPALCLG VFDVTLYDMV GAYSTFVNQG VWTEPIFITR IEDKNGNILQ
NFVPKTKEVL SEETAYLMVH MLKGATEEKG GTALGLNKYG LLWNGAEIGG KTGTTQNYSD
GWFVGITTQL TTGIWVGGDD RSIHFRSMND GQGARMAMPI WAIFMNHLYN DPKTGILKER
FPTPASPLSV EINCKKFKEV ENANSNTNPN SSVIKNQNIP DF
|
|---|
| |