Gene CHU_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0167 
Symbol 
ID4183560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp207699 
End bp208760 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content36% 
IMG OID638070176 
Productglycosyltransferase/acetylmuramyl pentapeptide phosphotransferase 
Protein accessionYP_676799 
Protein GI110636592 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0422469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.109952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACT TTTACTCGAT ATTAATATTC TCCTGGGCAT TCTTTGTTGC TTTGTTTGCA 
ATTCCTTCCA TCATACAGGT TGCACACAGC AAACAGCTAT TGGATATTCC CAATAGCCGC
CGGTTACACT TGTTTGATAC ACCCAGATTG GGAGGATTGG CAATTTTTGC CGGACTTATT
TCAGCGTTAA TGCTTTTCGG GGAAATAAAT AATGCTGTTC AAAAATTAAT TGCAGCAACT
ATTATTATTT TTTTTATCGG GTTAAAGGAT GATATGGTTT CGGTTTCAGC GTTCAAGAAA
TTCTTTGTAC AGGTATTAGC TGCAAGCATC GTTGTTTTTT TAGGCGACTT AAAAATTGAA
AGTTTTCAGG GTGTTTTTGG TATCACCGTA CTGCCAGATG GAATAAGTTA TTTCTTCACA
TTAATTGTCG TTTTAGGTAT TACAAATGCA TTCAACCTGA TTGACGGATT GGATGGATTA
GCCGGCACAA TCGCAGTTCT CACCTGCTTA TTTTATGGGT ACATCTTTAT GTCTGTTGGC
GGTGCCGCCA GTCATCCTTA TGCCTTGGTT TGTTTTTGTT TAACAGGAGC ATTGTTAGGA
TTTTTAAGAT ATAATATTTT CAAAGCTCAG ATATTTATGG GCGATACCGG ATCATTAATC
AGCGGCTTTG TTGTTGCCTT TTTAGCCGTA AAAATTATTG CTCTGTATGA AAACAATGGA
TACAATTTAA TCTCCTTACC TGCTGTTGCA ATTGCTCCAA TATTATTACC TTTAGCAGAT
ACATTAAGAG TATTTGTGCT TCGCGTATTA GCAGGCTACA GCCCATTTAC TCCGGATAGC
AATCACTTGC ATCATCGCTT AATGGCTTTA GGTTTTTCAT CTCTTTCAAT CGTATGCCTG
ATGTTTTTAT GCACGATATG CAGTATTTCT GCAGCAATGC TCATGACTCA GGTAAATCAA
ACAGTATTAT TAATAGGTAT GTTTGGAGGC ATTTTTATTT TAATGGCCTT TATAGAAATA
ATTTATAAAA AGAGAACAAA AGCGTGTATA AGCAACTTAT AA
 
Protein sequence
MIYFYSILIF SWAFFVALFA IPSIIQVAHS KQLLDIPNSR RLHLFDTPRL GGLAIFAGLI 
SALMLFGEIN NAVQKLIAAT IIIFFIGLKD DMVSVSAFKK FFVQVLAASI VVFLGDLKIE
SFQGVFGITV LPDGISYFFT LIVVLGITNA FNLIDGLDGL AGTIAVLTCL FYGYIFMSVG
GAASHPYALV CFCLTGALLG FLRYNIFKAQ IFMGDTGSLI SGFVVAFLAV KIIALYENNG
YNLISLPAVA IAPILLPLAD TLRVFVLRVL AGYSPFTPDS NHLHHRLMAL GFSSLSIVCL
MFLCTICSIS AAMLMTQVNQ TVLLIGMFGG IFILMAFIEI IYKKRTKACI SNL