| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0163 |
|---|
| Symbol | pepN |
|---|
| ID | 4183556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 202703 |
|---|
| End bp | 204340 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638070172 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_676795 |
|---|
| Protein GI | 110636588 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0529706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.713182 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCAGGT TTTTACTCCT TATTTTTTGG TGCATAAGCC TGTTACCTAT ACAATCCGTT
GCTCAAAGCA CTACCTTTAA TCGGTTTGAC TCATTAAGAG GTGCATTAGA TATTAACCGT
ACATGCTTTG ATGTACATTA TTATGATCTT TCTGTTAAAA TAGATGTTGC TCAAAAACGA
CTGCAAGGAG TAAATAATAT TTATTTTAAG ACAACAACCC CTACGTCTAC AATCCAGCTT
GATCTCTATA ACAACCTGAT CATTGATTCA GTTTGTTATA ATAACATAAA ACTATCTTTC
AAGCGCGACA GCAATAGTTT CTTTGTTTAT TTTCCTTCCA TACTTAGCGG AAATGCTTTT
GGTAACATAC ATGTTTACTA TGAAGGCAAC CCTACGATAG CTAAAAAAGC ACCGTGGGAT
GGCGGCTGGG TTTTCACAAA AGACAGTTTG AACAGGCCTT GGGCAGCAGT TGCGTGTGAA
GGAATAGGAG CAAGCTTGTG GTGGCCGTTA AAAGATCATT TAAGTGACGA GCCGGATAGT
ATGCGCATGC ACTTCACTGT ACCACAAGGC CTGATGGCTA TTGGCAATGG GGTGCTGGAA
TCAACGGATA CAAAAGCAGG TTTAACGATA TACAATTGGA AAGTCAATTA CCCGATTAAC
AGCTATAATG TTACGTGTAA TATTGCCAAC TATATTCACC TTACAGATTA CCATGTTCAG
CTCAATAAAG ACACATTAGC TATTGATTAT TATGTGCTGG ATTATAATCA GCCAAAAGCA
TGGAACCATT TCAAGCAGGT TCATCCAATG CTGAATTGCT ACGAACATTA TTTTGGTCCA
TATCCTTTTT TTAGAGATGG TTATGCACTC GTTGAAACGC CTTATTGGGG CATGGAACAT
CAGGGCGCTA TCGCTTACGG CAACGACTAT ACAAATAAAA TCATAGACTT TGATTATATC
ATCATTCACG AAAGTGGCCA TGAATGGTGG GGAAACAATG TAAGTACAAA AGACCATGCA
GAAATGTGGA TCCATGAATC TTTTACAACA TATACAGAAA ATTTATTGGT AGAATATTTT
TACGGTTATG ATATGTCTGT CCGTTATTTA AATCTGAACA AACAGTTAAT CAAAAACGAA
GAGTCGATCA TTGGCCCATT AGACGTGAAC TACGAAGGCT GGCAAGGTTC AGACATGTAT
TATAAAGGAG CCTGGATATT ACATACCTTC AGAAATGTTT TACATAACGA CAGCCTTTGG
TTTTCTATTT TGAAAAATAT ACAAACAGAT TTTGCATTGC AGACAATTGA TACAAAAACA
CTTCTTGCTT ATATTAATGC CAAAGCAGGT AAAGATTACA CATGGTTCTT TGAACAATAT
TTGTATCATG CTAAGCCTCC CATTCTCGAT TTTTATACTG AAAAAATAAA GAAAAATATG
CGGGTGTATT ATAAATGGAA CAATACACGC TCTGATTTTA GTATGTCTAT TCCTGTTAAC
AATGCCAATA ATACCCTGTC TTATATTACA CCAACTTCAG ACTATAAATT CATTGATGTA
AAATTTAAAA ATTACAACAA AAACTTTTTC AATCAGAACT ACAATTATTA CCTGCTTCAA
TTAGCCAAAA GGCCTTAA
|
|---|
| Protein sequence | MCRFLLLIFW CISLLPIQSV AQSTTFNRFD SLRGALDINR TCFDVHYYDL SVKIDVAQKR
LQGVNNIYFK TTTPTSTIQL DLYNNLIIDS VCYNNIKLSF KRDSNSFFVY FPSILSGNAF
GNIHVYYEGN PTIAKKAPWD GGWVFTKDSL NRPWAAVACE GIGASLWWPL KDHLSDEPDS
MRMHFTVPQG LMAIGNGVLE STDTKAGLTI YNWKVNYPIN SYNVTCNIAN YIHLTDYHVQ
LNKDTLAIDY YVLDYNQPKA WNHFKQVHPM LNCYEHYFGP YPFFRDGYAL VETPYWGMEH
QGAIAYGNDY TNKIIDFDYI IIHESGHEWW GNNVSTKDHA EMWIHESFTT YTENLLVEYF
YGYDMSVRYL NLNKQLIKNE ESIIGPLDVN YEGWQGSDMY YKGAWILHTF RNVLHNDSLW
FSILKNIQTD FALQTIDTKT LLAYINAKAG KDYTWFFEQY LYHAKPPILD FYTEKIKKNM
RVYYKWNNTR SDFSMSIPVN NANNTLSYIT PTSDYKFIDV KFKNYNKNFF NQNYNYYLLQ
LAKRP
|
|---|
| |