Gene CHU_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0140 
Symbol 
ID4183573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp168425 
End bp170893 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content40% 
IMG OID638070143 
Producthypothetical protein 
Protein accessionYP_676773 
Protein GI110636566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.164287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTAGTG CGTCATTAAT TGCTCAGGTA TATCATTTTG ACACAAGAGA AATACCGATA 
AATTGGTATG GCAACCGAAG CGATTTTACT GTTAATGCCG TAGGTGAGTT ACAATTGAGT
GCTGCAGCGG GCACAACCAC AGCTTTATTA AGCTGGCCAA TCGACAGAAC TGAAAATACT
TCCTGGGAAT TTTTAGTACG CTACGATTTT GCAGCATCTG CCACCAACTA TGCAAGCTTC
TACTTGCTTT CTTCTGCAGA GGATCTTGTG TCTTCAACAA ATAGCGCATA TTATTTAAAA
ATAGGAGGAG AATCGGGAGC AACGGATAAA CTTGAATTGA TTTTTCAGTC GGGTTCATCC
AAAACAACCA TTATAGCCAG TCAATCCGGT CTTGCCGGAG GCAATACCAT TGCCATGCGG
ATTCGCATCT GTCAGTTACA AACAGGTGAA TGGCTGCTGT TTGGAGATGA AACAGGCGGG
CGTAATTTTG TTGCCATTGG AAAAGGAACA CATGTTTCTT CTGCGCAGTT TTTATTTTCA
GGTATTCGCT GTCTGTATAC GTCTACACGC AGAGATAAAT TTTATTTTGA TGATATAAAA
ACAGAAGAAC CGTTTGCAAT AAAAAAGTAC GAATTCAATA ACGAAAAACA ACTTACAATC
ATCTTCACCA AACCAATAAA AAATCCGCAT GAAACCCAGC TAGATATTGA TCTGGGGCAG
GTATATACAA AACTTTTTGT TGAAAATGTA CTGGAAATAA AAACGGATAA TGCTATTGAC
CCGGGTCAAT ATACGATACG GGTGTTAAAC GCACATTCGA TTCACGCAGA CACGCTGATA
AGCAACCTGG CAGTTATAAA AAAAGATGCC CGCTATTATG CCGGACAGCT GCGTATTACA
GAGTGGATGA GCGATCCCAG TCCTACATAC GGCTTGCCGG AGATAGAATG GGTAGAGATT
ATAAATGTAT CAGACACACG TATTGAAACG GCTCAATTGT CCTTGTCAGA TCCTACTAAA
AAAGTAAAAC TCCCTGCGTA TTCATTAAAA AAAGATTCTG CTGTTGTACT TTGTTCGGCC
GGGGGATGTG CACAATTAGA CATCCATAAT TGTATTGAAG CAGATGCATT ACCCAATTTA
AACAACACGG CAGATTCCTT ATTTCTCTGG GCAAACGACA CCATATTGGT TGATTATATT
CACTATGACA TAACGTTGCT TCCCAATGAT TACCGCAGAA ACGGTGGGTA TTCCATTGTC
CGTACTAGAT TGCCTCAAGC CTGCGTATAC GATCAGCATC TCGCTTATGC TTCCGAACAA
CAGGGCGGTT CACCTGGTAT TGCTTCAGGC AGCATTACAC AAGTGAAACT CCGCGCTACA
TCCGAATTTA TTTCAGATAC AGAAGCACAT ATTTTTTTAA ATGCAATCGG CTCCATTCAA
GGGCAGCATA TATCCGCGTA TAGAACTATT AATGCAACCA GTCTGGTGAT GAACTATTCA
ACGCAAATAG AACTGCTTTT TGAAGAGGCA ATTTTGCCCG GCAACGCAAT TACCCTTACC
CTTGACTCCA TAAAAACATG TTTAAATCAT ACAGATTTTC TTGGTGCACA AATTCAATTG
GTTCATCCAA AAAAGATTGA AAAGGGAACT GTTTTTTTTA ATGAAATATT ATACAATGCA
TATTCCGGAG GCGTTGATTT TATTGAACTT TACAATACAT CTGAAGAATT TATTCAGTTG
AAAAATATAT ATTTTATGTA TGCCGACCCG AAAGGCAGGC AGCAACAAGC GTTTTTGAAA
AAAAATCTGA CAATTGCTCC CAATGACTTT GTTGTATTGG CTGCGGATAC AACATTATTA
AAACGACAGT ACCCGAACAC ACGTATTGAA AACTGTGCTC AAGTACCGGG TTTCATTTCA
TTTGCAGATG AGGGCGGAAC ATTGATTATG AAAAACGAAA TGCCTGATAC ATTGGATATG
ATCACATTTA ACGATGACTT GCAGAACCCG TTAAACAGAA GTAATGAAGG CATTTCACTT
GAAAAAATAG ATGCCTATAA AACATATTAT TCAGCAGCAA ACTGGACATC ATCCGCATCC
GGAGCAACAC CCGGTTATAT CAATAGCCAG AATTTGAGTG CACCGCCAGA AGAGTCGCAG
CCTTTTTATT GTCAGCCGTG CCACATCACT ACCGATCTGA ACGGAAGGAA CGATTATGTA
CTGCTGTATC TGAATCCCTC AACGACAGGA ACATTTGCAT CCGTAAGTAT CTACACACTT
GCAGGCGAAC TCGTTGATAA GGTATGTGTA AATCAACTGC TTGGAAACCA AAACATATTC
CAATGGAATG GACAGCAACA ATCAAACACA CTTTTAACCG ATGGTATCTA CATTGCAGTA
GCTGAATGGT GGTTGCCAAA TGGAAAGATG CGCACAGCAA AAATTGCTAT AAGTACTTCA
CACTATTGA
 
Protein sequence
MFSASLIAQV YHFDTREIPI NWYGNRSDFT VNAVGELQLS AAAGTTTALL SWPIDRTENT 
SWEFLVRYDF AASATNYASF YLLSSAEDLV SSTNSAYYLK IGGESGATDK LELIFQSGSS
KTTIIASQSG LAGGNTIAMR IRICQLQTGE WLLFGDETGG RNFVAIGKGT HVSSAQFLFS
GIRCLYTSTR RDKFYFDDIK TEEPFAIKKY EFNNEKQLTI IFTKPIKNPH ETQLDIDLGQ
VYTKLFVENV LEIKTDNAID PGQYTIRVLN AHSIHADTLI SNLAVIKKDA RYYAGQLRIT
EWMSDPSPTY GLPEIEWVEI INVSDTRIET AQLSLSDPTK KVKLPAYSLK KDSAVVLCSA
GGCAQLDIHN CIEADALPNL NNTADSLFLW ANDTILVDYI HYDITLLPND YRRNGGYSIV
RTRLPQACVY DQHLAYASEQ QGGSPGIASG SITQVKLRAT SEFISDTEAH IFLNAIGSIQ
GQHISAYRTI NATSLVMNYS TQIELLFEEA ILPGNAITLT LDSIKTCLNH TDFLGAQIQL
VHPKKIEKGT VFFNEILYNA YSGGVDFIEL YNTSEEFIQL KNIYFMYADP KGRQQQAFLK
KNLTIAPNDF VVLAADTTLL KRQYPNTRIE NCAQVPGFIS FADEGGTLIM KNEMPDTLDM
ITFNDDLQNP LNRSNEGISL EKIDAYKTYY SAANWTSSAS GATPGYINSQ NLSAPPEESQ
PFYCQPCHIT TDLNGRNDYV LLYLNPSTTG TFASVSIYTL AGELVDKVCV NQLLGNQNIF
QWNGQQQSNT LLTDGIYIAV AEWWLPNGKM RTAKIAISTS HY