Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0140 |
Symbol | |
ID | 4183573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 168425 |
End bp | 170893 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070143 |
Product | hypothetical protein |
Protein accession | YP_676773 |
Protein GI | 110636566 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.164287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTAGTG CGTCATTAAT TGCTCAGGTA TATCATTTTG ACACAAGAGA AATACCGATA AATTGGTATG GCAACCGAAG CGATTTTACT GTTAATGCCG TAGGTGAGTT ACAATTGAGT GCTGCAGCGG GCACAACCAC AGCTTTATTA AGCTGGCCAA TCGACAGAAC TGAAAATACT TCCTGGGAAT TTTTAGTACG CTACGATTTT GCAGCATCTG CCACCAACTA TGCAAGCTTC TACTTGCTTT CTTCTGCAGA GGATCTTGTG TCTTCAACAA ATAGCGCATA TTATTTAAAA ATAGGAGGAG AATCGGGAGC AACGGATAAA CTTGAATTGA TTTTTCAGTC GGGTTCATCC AAAACAACCA TTATAGCCAG TCAATCCGGT CTTGCCGGAG GCAATACCAT TGCCATGCGG ATTCGCATCT GTCAGTTACA AACAGGTGAA TGGCTGCTGT TTGGAGATGA AACAGGCGGG CGTAATTTTG TTGCCATTGG AAAAGGAACA CATGTTTCTT CTGCGCAGTT TTTATTTTCA GGTATTCGCT GTCTGTATAC GTCTACACGC AGAGATAAAT TTTATTTTGA TGATATAAAA ACAGAAGAAC CGTTTGCAAT AAAAAAGTAC GAATTCAATA ACGAAAAACA ACTTACAATC ATCTTCACCA AACCAATAAA AAATCCGCAT GAAACCCAGC TAGATATTGA TCTGGGGCAG GTATATACAA AACTTTTTGT TGAAAATGTA CTGGAAATAA AAACGGATAA TGCTATTGAC CCGGGTCAAT ATACGATACG GGTGTTAAAC GCACATTCGA TTCACGCAGA CACGCTGATA AGCAACCTGG CAGTTATAAA AAAAGATGCC CGCTATTATG CCGGACAGCT GCGTATTACA GAGTGGATGA GCGATCCCAG TCCTACATAC GGCTTGCCGG AGATAGAATG GGTAGAGATT ATAAATGTAT CAGACACACG TATTGAAACG GCTCAATTGT CCTTGTCAGA TCCTACTAAA AAAGTAAAAC TCCCTGCGTA TTCATTAAAA AAAGATTCTG CTGTTGTACT TTGTTCGGCC GGGGGATGTG CACAATTAGA CATCCATAAT TGTATTGAAG CAGATGCATT ACCCAATTTA AACAACACGG CAGATTCCTT ATTTCTCTGG GCAAACGACA CCATATTGGT TGATTATATT CACTATGACA TAACGTTGCT TCCCAATGAT TACCGCAGAA ACGGTGGGTA TTCCATTGTC CGTACTAGAT TGCCTCAAGC CTGCGTATAC GATCAGCATC TCGCTTATGC TTCCGAACAA CAGGGCGGTT CACCTGGTAT TGCTTCAGGC AGCATTACAC AAGTGAAACT CCGCGCTACA TCCGAATTTA TTTCAGATAC AGAAGCACAT ATTTTTTTAA ATGCAATCGG CTCCATTCAA GGGCAGCATA TATCCGCGTA TAGAACTATT AATGCAACCA GTCTGGTGAT GAACTATTCA ACGCAAATAG AACTGCTTTT TGAAGAGGCA ATTTTGCCCG GCAACGCAAT TACCCTTACC CTTGACTCCA TAAAAACATG TTTAAATCAT ACAGATTTTC TTGGTGCACA AATTCAATTG GTTCATCCAA AAAAGATTGA AAAGGGAACT GTTTTTTTTA ATGAAATATT ATACAATGCA TATTCCGGAG GCGTTGATTT TATTGAACTT TACAATACAT CTGAAGAATT TATTCAGTTG AAAAATATAT ATTTTATGTA TGCCGACCCG AAAGGCAGGC AGCAACAAGC GTTTTTGAAA AAAAATCTGA CAATTGCTCC CAATGACTTT GTTGTATTGG CTGCGGATAC AACATTATTA AAACGACAGT ACCCGAACAC ACGTATTGAA AACTGTGCTC AAGTACCGGG TTTCATTTCA TTTGCAGATG AGGGCGGAAC ATTGATTATG AAAAACGAAA TGCCTGATAC ATTGGATATG ATCACATTTA ACGATGACTT GCAGAACCCG TTAAACAGAA GTAATGAAGG CATTTCACTT GAAAAAATAG ATGCCTATAA AACATATTAT TCAGCAGCAA ACTGGACATC ATCCGCATCC GGAGCAACAC CCGGTTATAT CAATAGCCAG AATTTGAGTG CACCGCCAGA AGAGTCGCAG CCTTTTTATT GTCAGCCGTG CCACATCACT ACCGATCTGA ACGGAAGGAA CGATTATGTA CTGCTGTATC TGAATCCCTC AACGACAGGA ACATTTGCAT CCGTAAGTAT CTACACACTT GCAGGCGAAC TCGTTGATAA GGTATGTGTA AATCAACTGC TTGGAAACCA AAACATATTC CAATGGAATG GACAGCAACA ATCAAACACA CTTTTAACCG ATGGTATCTA CATTGCAGTA GCTGAATGGT GGTTGCCAAA TGGAAAGATG CGCACAGCAA AAATTGCTAT AAGTACTTCA CACTATTGA
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Protein sequence | MFSASLIAQV YHFDTREIPI NWYGNRSDFT VNAVGELQLS AAAGTTTALL SWPIDRTENT SWEFLVRYDF AASATNYASF YLLSSAEDLV SSTNSAYYLK IGGESGATDK LELIFQSGSS KTTIIASQSG LAGGNTIAMR IRICQLQTGE WLLFGDETGG RNFVAIGKGT HVSSAQFLFS GIRCLYTSTR RDKFYFDDIK TEEPFAIKKY EFNNEKQLTI IFTKPIKNPH ETQLDIDLGQ VYTKLFVENV LEIKTDNAID PGQYTIRVLN AHSIHADTLI SNLAVIKKDA RYYAGQLRIT EWMSDPSPTY GLPEIEWVEI INVSDTRIET AQLSLSDPTK KVKLPAYSLK KDSAVVLCSA GGCAQLDIHN CIEADALPNL NNTADSLFLW ANDTILVDYI HYDITLLPND YRRNGGYSIV RTRLPQACVY DQHLAYASEQ QGGSPGIASG SITQVKLRAT SEFISDTEAH IFLNAIGSIQ GQHISAYRTI NATSLVMNYS TQIELLFEEA ILPGNAITLT LDSIKTCLNH TDFLGAQIQL VHPKKIEKGT VFFNEILYNA YSGGVDFIEL YNTSEEFIQL KNIYFMYADP KGRQQQAFLK KNLTIAPNDF VVLAADTTLL KRQYPNTRIE NCAQVPGFIS FADEGGTLIM KNEMPDTLDM ITFNDDLQNP LNRSNEGISL EKIDAYKTYY SAANWTSSAS GATPGYINSQ NLSAPPEESQ PFYCQPCHIT TDLNGRNDYV LLYLNPSTTG TFASVSIYTL AGELVDKVCV NQLLGNQNIF QWNGQQQSNT LLTDGIYIAV AEWWLPNGKM RTAKIAISTS HY
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