Gene CHU_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0136 
SymbolmetX 
ID4184077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp164212 
End bp165228 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content43% 
IMG OID638070139 
Producthomoserine O-acetyltransferase 
Protein accessionYP_676769 
Protein GI110636562 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID[TIGR01392] homoserine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0306833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTATC ATATTTATAC GCACAAATCT CCGGTTACGC TTGAGTCCGG CGCTGTTTTA 
CCCGAAGTCC GCATTCAATA TTCCACTTCA GGCATCAGAA ATGCAGATGA AGATAATATC
ATTTGGGTTT GCCATGCGCT TACCGCTAAT TCCGATGTAG AATCCTGGTG GCCGGGTCTT
GTTGGTACAG ATTATTTATA TAATCCGCAA GAACACTTTA TCGTGTGCGC CAATATTCTA
TCTTCCTGCT ACGGCACTAC CGGACCAACA GAAACAAATC CGGAAACAAA TAAACCATAC
TTCCTTTCCT TCCCGGTTGT CACCATCCGC GACATGGTTA CCATTCATGA TATACTGAGA
GAACACTTAG AAATAAAAAA AATTCATACA CTTATTGGCG GTTCTCTGGG CGGGCAGCAA
GCGATGGAGT GGGCCATTCA ACAGCCTCAT TTATTTCAGC ATCTTATACT ATTATCTACA
AATGCATTTC ACTCTCCCTG GGGCATTGCC TTTAATGAGT CGCAGCGTAT GGCAATAGAC
ATGGACCCTA CATGGAAAAA TCCTTCGCTT GACGCAGGCA GAGAAGGGTT GAAAACGGCA
CGCTCTATAG CTATGCTTTC CTACAGAAGT TACGAGACCT ATGTAGAAAC ACAGCGTGAA
GAAGACTCTT CTAAAACGGA TGATTACAGA GCTATTACCT ATCAGCATTA CCAGGGTGAT
AAATTAGTAA AACGCTTCAA CTGCCACTCC TATTGGTATC TGTCTAAAGC AATGGACAGT
CATCATGTAG GAAGAAACAG AGAAAGTGCT GCAGCAGCAT TAGCATCTAT CCGCTCTAAA
ACACTTGTCA TCGGTATTTC TTCAGATATT TTATTTCCGG TTTGCGAACA GGAATACGTT
GCGAAGCATA TCTCCGGAGC ACAATATGTA TGCATTGATT CTCTGTATGG CCACGATGGG
TTTTTAACGG AAACGGACAA ACTGGATGTT GTTATCCGGA ATTTTTATCT CGAATAA
 
Protein sequence
MEYHIYTHKS PVTLESGAVL PEVRIQYSTS GIRNADEDNI IWVCHALTAN SDVESWWPGL 
VGTDYLYNPQ EHFIVCANIL SSCYGTTGPT ETNPETNKPY FLSFPVVTIR DMVTIHDILR
EHLEIKKIHT LIGGSLGGQQ AMEWAIQQPH LFQHLILLST NAFHSPWGIA FNESQRMAID
MDPTWKNPSL DAGREGLKTA RSIAMLSYRS YETYVETQRE EDSSKTDDYR AITYQHYQGD
KLVKRFNCHS YWYLSKAMDS HHVGRNRESA AAALASIRSK TLVIGISSDI LFPVCEQEYV
AKHISGAQYV CIDSLYGHDG FLTETDKLDV VIRNFYLE