| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0119 |
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| Symbol | trmD |
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| ID | 4184060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 143648 |
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| End bp | 144355 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070121 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_676752 |
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| Protein GI | 110636545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.552167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATTG ATATTATTAC ATGCTTACCT AAATTACTGG ACAGTTTCTT TGGGCACTCA
ATCTTAAAGC GCGCTCAGGA AAAAGGAATT GCGGAAGTTG TTGTTCATGA CCTGAGAACA
TACACCTTGT TTAAACACAA ACAAGTAGAT GATTACTCGT ATGGAGGAAG CGCCGGAATG
GTATTGATGG TTGAACCCAT TGATCGTTGC ATTACAGCCT TAAAAGCAGA ACGGGAATAC
GATGCAGTCA TTTACATGAC TCCCGATGGA AAAACGTTTG ACCAGCAAAC GGCAAACCGC
TTCTCTTTGT ATAAAAACAT TATTATTCTT TGCGGGCATT ACAAAGGCGT TGATGAGCGC
GCGCGCCAGG CATTTATCAC ACATGAAATA AGTATAGGTG ATTATGTACT TTCTGGAGGT
GAACTTGCCG CCGCAGTTGT TTCAGACGCG CTGATCCGGT TAATTCCAGG TGTTTTGTCT
GATGAAACCT CCGCCTTAAC CGATTCTTTT CAGGATAGCC TGCTGGCACC GGCAGTATAT
ACCCGCCCAG CTGATTATAA AGGCATGATC GTTCCGGAAA TTTTACTTTC AGGCAATGAA
AAGGAAATAG AAAAATGGCG TTTTGAGAAT GCTTTGGAGC GGACAAAGGA AAGAAGACCA
GATCTTTACC AAAAATTCAC TAAAGCGTAC GACGCAGACG GCAAATAA
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| Protein sequence | MRIDIITCLP KLLDSFFGHS ILKRAQEKGI AEVVVHDLRT YTLFKHKQVD DYSYGGSAGM
VLMVEPIDRC ITALKAEREY DAVIYMTPDG KTFDQQTANR FSLYKNIIIL CGHYKGVDER
ARQAFITHEI SIGDYVLSGG ELAAAVVSDA LIRLIPGVLS DETSALTDSF QDSLLAPAVY
TRPADYKGMI VPEILLSGNE KEIEKWRFEN ALERTKERRP DLYQKFTKAY DADGK
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