| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0118 |
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| Symbol | rimM |
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| ID | 4185948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 143104 |
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| End bp | 143658 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070120 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_676751 |
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| Protein GI | 110636544 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.561423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCCGG CAGATAACAT CCTTTGGGGA AATATTATCA AGGTTCATGG TGTAAAAGGA
GAGGTATTAG TTCAGGTATT TTCTGATGAC CTTACTGATT ACGAAACATT GGAATCTGTT
TTTGTTGAAA TAAAACAAAA ACAGATTCCT TTTTTTTTAA GCACATTTAA TTTTGCTACT
CAAAAACGGT GTATACTTTC TTTTGAAGAC GTTACTACTG TTGAGCAGGC AAAACCACTT
GTTGGAGCAG ACATTTACAT ACCAGTATCC AAAATGGCAG AAGCCGACGA AAGTCGACTG
TCATATCAGG CAATCATTGG CTTTGAAGTA ATGGATACCA TTCAGGGGAA ATTGGGTGTC
ATTTCTAATT TCTTTCAGAA AACCGGCCAG GACTTATTAA TGATGGATTA CCAGGATGCC
GAAATTTTAA TACCGGTAAC AGAAGAAATT GTACATTCCG TAGATGTTAA AACAAAGCAG
GTAATTACAA CCTTACCTGA AGGATTGATT GAAATTTATC TGAACGAAGA CGCCTCAGAA
CCCGATGCGG ATTGA
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| Protein sequence | MNPADNILWG NIIKVHGVKG EVLVQVFSDD LTDYETLESV FVEIKQKQIP FFLSTFNFAT
QKRCILSFED VTTVEQAKPL VGADIYIPVS KMAEADESRL SYQAIIGFEV MDTIQGKLGV
ISNFFQKTGQ DLLMMDYQDA EILIPVTEEI VHSVDVKTKQ VITTLPEGLI EIYLNEDASE
PDAD
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