Gene CHU_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0107 
Symbol 
ID4185937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp130069 
End bp130986 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content36% 
IMG OID638070109 
Productpolyphosphate:AMP phosphotransferase 
Protein accessionYP_676740 
Protein GI110636533 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.500802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.329241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTG ATTTTTCAAA GCTTTCAAAA TATGTTGAAA CGCTTAGAGT AAAACCGAAA 
CAATCCATTG ATCTTAAAAA AGATTTTGAT ACAGATTATG ATCACAAAAT GCTTACTAAA
GAGGAAGGGG AAGAATTATT AAACCTGGGC ATTAGCAAAT TATCTGAGAT ACAGGAAAAG
CTATATGCAA GCGGAACTAA AAGTGTATTG ATTGTTTTTC AGGCAATGGA TGCTGCAGGG
AAAGACGGCA CGGTTAAACA TATTATGACA GGCTTGAACC CACAAGGAGT GAAAGTAACC
AGCTTTAAAG TACCAAGCAA AATAGAATTG TCACATGATT ATTTATGGAG ACATTATGTT
GCGTTGCCTG CAACAGGAGA AATCGGGATT TTTAACAGGT CTCATTACGA GAATGTGTTA
GTGACGCGCG TGCATCCGGA ATATTTACTG TCGGAGCAAA CGTCAGGGGT TACTGCTATT
GAACAGGTAA ATCAGAAATT TTGGGACAAA CGATTTCAAC AGATCAATAA CTTTGAACAG
CATATATCTG AAAATGGAAC AATAGTGTTA AAGTTCTTTT TACATGTTTC AAAAAAAGAA
CAGAAAAAGA GATTTATTGA ACGCATTGAA TTGGACACCA AAAACTGGAA ATTTTCAACC
GGAGATTTAA AAGAACGGGC ACACTGGAAA GATTATCGAA ACGCATATGA AGATATGCTG
GCTAATACAT CAACGAAACA GGCGCCATGG TTTGTTATTC CTGCAGATGA TAAATGGTTT
ACACGTTTAT TGATTGCTGA AATTATTTGC ACCGAACTGG AAAAATTAAA CCTGACATTC
CCAACTGTTT CGCTTGAACA AAAAGCTGAA CTGGAAAAAG CAAAGGCAGA ATTAGTCGCA
GAAAAAAGTT CAGATTAA
 
Protein sequence
MATDFSKLSK YVETLRVKPK QSIDLKKDFD TDYDHKMLTK EEGEELLNLG ISKLSEIQEK 
LYASGTKSVL IVFQAMDAAG KDGTVKHIMT GLNPQGVKVT SFKVPSKIEL SHDYLWRHYV
ALPATGEIGI FNRSHYENVL VTRVHPEYLL SEQTSGVTAI EQVNQKFWDK RFQQINNFEQ
HISENGTIVL KFFLHVSKKE QKKRFIERIE LDTKNWKFST GDLKERAHWK DYRNAYEDML
ANTSTKQAPW FVIPADDKWF TRLLIAEIIC TELEKLNLTF PTVSLEQKAE LEKAKAELVA
EKSSD