Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0106 |
Symbol | yvqE |
ID | 4185936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 127878 |
End bp | 129776 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638070108 |
Product | membrane-associated sensory histidine kinase-like ATPase |
Protein accession | YP_676739 |
Protein GI | 110636532 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.100844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.392929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTCAAG GGTTTAAAAT CGGTTTTATT CAAAAACTTA CTATTTCTAC GAAATTGGCC ATTTCGTATC TGTTGATCGG TATCGTAACG CTGCTTACCG TATCTTCTAT CCTCTATTAT ATTTTCAAGA AAACAATTAT TGATAAAACC ACTAATCAAT TAATTGCTGT GAATGTGATC AAGAAAAAAT CCATCGAGGA TTTTCTCTTA GGTACGATCC GGGATATACG TGATGATGAG TTTCAGCTGA ATGCATATCC ATTAAACAGT TTAGGTAGCC TGCACATATT GGATAAAAAT TTTTCAATGA ACAGCAATGA TTCTATATAT GATAGTTCTA TGCTTTCTGT GTATGAAGAT ATTGTATTCA TGGACGCTGC AGGTACGGTT ATCAAGCATG CTACTCCATT GATCACCTTT TCTGATTCGG CATTAAAAGA TCTGCATCAT AAATTCAGAT TAAATCATGC GTCAACTGGC AATGAAATAT TTTTTTATGA CATTACAAAT CAATATGGTG TAGATCACCC GCAATTGTTG TGTGTGTTTA AATTGAAACA TGCATCTATC TGGGGTATAT ATATCATTAA CCATTCTTAT ATAAATGATA TTATAGAAAT ACGTTCGGGA ATGGGTAGTA CCGGAGAATC GTATCTGGTA GGCAAGGATC TTTATATGCG CAGTAAATCG CGTTTTTTTG AAGATACTAT TCCAAATAAA ATTCAGGTAA ATACCAGTGC TACACAACAC TTCTTCTCTG GTAAAACACT TCAGGAAGGT GCTATTATAC ATGATTACAG AAACATTCCT GTCATAAGTG TACAAAGTAA AATTGACATA CCTGGTATTG ATTGGGTGTT GATCTCTGAA ATAGATGTAG ATGAAGCTAT GTCAACAGTA GATACCATAA AGAATTACAT GATTGGTGTT GCCGTTTTGA TCTCGCTGGT TTTAATGGTC GTTACATTGC TTTTAGTCCG GCAGATTGTG GATCCTATTG CTAATCTAAC GCGCTTAATT GATACAATTT CGTTAGGAAA ATTTAATCAG TCTTTTCAAA AGCAGAATTT TTCTGAAGAT GAAATAGGGA AGTTTGAAGA TGCGATATTA AATCTTCAGC ATCGTATAGC AGAAACAGCT TCGTTTGCAG ATGAAATAGG TAAAGGCAAT CTTTCTGCTG AATATGAAAC CATGAGTGAT GAAGACACGC TGGGTAACGC ATTATTGAAA ATGCGTGTTG ACTTAATTGA AAGCAAAGCC AATGAAAAAC TTTTAACCAA ACAAAAAACA AGCGCTCTTA TTGAAGGCCA GGAAAAAGAA CGGGAACGGT TAGCCAGAGA ACTTCATGAT GGTCTTGGAC AAATGCTTAC AGCTATACGA TTACGCATTG GCATGCTACA GGACGAGCAT AAAAGCAAGA AGGAAATTCA ACAGATTATT GACGATACGA TAAAAGAATT ACGACGCATT TCAAACAATG TAGTGCCGGC TGTACTTATT GATTTTGGGC TTGCTGCAGG TATTAAATCA TTGGTTGAGT ATTCTATGAA ATTGTATCAT ATACCCATTG TGTTGTCATA CGATTCATTT GGATTTGAAA CAAAACCAAA GAATGATTTT GATATAAATG TAAGTCTTTA TCGCATTGCA CAGGAAGCTA TCAATAATTC CATCAAATAT TCTAACACAT CTGAAATACG CATTTCATTA GTGGAAAAAA TTGACAGCAT ACAGATGGAA ATTTCTGACA ATGGCATTGG ATTTGATCTG AAAAATAAAG TTGATGGAAA GGGCATCGGC AACATGAATG AACGTGCGAA ACTCATTGAT GGAAACTTCT CTATTCAATC AAATAAAACA GGTACAACAA TATTAATTAC GGTACCTTTA AACTTTTAA
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Protein sequence | MAQGFKIGFI QKLTISTKLA ISYLLIGIVT LLTVSSILYY IFKKTIIDKT TNQLIAVNVI KKKSIEDFLL GTIRDIRDDE FQLNAYPLNS LGSLHILDKN FSMNSNDSIY DSSMLSVYED IVFMDAAGTV IKHATPLITF SDSALKDLHH KFRLNHASTG NEIFFYDITN QYGVDHPQLL CVFKLKHASI WGIYIINHSY INDIIEIRSG MGSTGESYLV GKDLYMRSKS RFFEDTIPNK IQVNTSATQH FFSGKTLQEG AIIHDYRNIP VISVQSKIDI PGIDWVLISE IDVDEAMSTV DTIKNYMIGV AVLISLVLMV VTLLLVRQIV DPIANLTRLI DTISLGKFNQ SFQKQNFSED EIGKFEDAIL NLQHRIAETA SFADEIGKGN LSAEYETMSD EDTLGNALLK MRVDLIESKA NEKLLTKQKT SALIEGQEKE RERLARELHD GLGQMLTAIR LRIGMLQDEH KSKKEIQQII DDTIKELRRI SNNVVPAVLI DFGLAAGIKS LVEYSMKLYH IPIVLSYDSF GFETKPKNDF DINVSLYRIA QEAINNSIKY SNTSEIRISL VEKIDSIQME ISDNGIGFDL KNKVDGKGIG NMNERAKLID GNFSIQSNKT GTTILITVPL NF
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