Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0104 |
Symbol | |
ID | 4185934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 126804 |
End bp | 127208 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638070106 |
Product | two-component response regulator |
Protein accession | YP_676737 |
Protein GI | 110636530 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0412586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.28908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAT TCAAGTCCAT ATTACTAATT GATGATGACG AAACAAGTAA TTTCATCAGT GAAGTTATTA TTAAAAAATT AGGCATTACG GAAACAATAA GTACCGTAAA AAATGGTGTA GAAGCGTTGA ACTTTGTCTC AAATAACTGT ACAATCAATT GTGCGCCAAC CTGTCCGCAA ATAATATTTT TAGATTTACA TATGCCCGTA ATGGACGGCT TTGATTTTCT AAAAGAATTA AAAAAGCAAA TGCCGTTATA TACTCAGAAG TTTAAAATAT TTGTCCTGTC ATCTTCCAAC AATCCAGCAG ACATAACTAA GACAAAGGAT TTTGATGTAG AAGGCTACAT TGTAAAACCA CTAAGTCAGG AAAAAATAAG CATGCTTTTA GAAGATGTAG CTTAA
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Protein sequence | MRKFKSILLI DDDETSNFIS EVIIKKLGIT ETISTVKNGV EALNFVSNNC TINCAPTCPQ IIFLDLHMPV MDGFDFLKEL KKQMPLYTQK FKIFVLSSSN NPADITKTKD FDVEGYIVKP LSQEKISMLL EDVA
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