Gene CHU_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0104 
Symbol 
ID4185934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp126804 
End bp127208 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content32% 
IMG OID638070106 
Producttwo-component response regulator 
Protein accessionYP_676737 
Protein GI110636530 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0412586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.28908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAT TCAAGTCCAT ATTACTAATT GATGATGACG AAACAAGTAA TTTCATCAGT 
GAAGTTATTA TTAAAAAATT AGGCATTACG GAAACAATAA GTACCGTAAA AAATGGTGTA
GAAGCGTTGA ACTTTGTCTC AAATAACTGT ACAATCAATT GTGCGCCAAC CTGTCCGCAA
ATAATATTTT TAGATTTACA TATGCCCGTA ATGGACGGCT TTGATTTTCT AAAAGAATTA
AAAAAGCAAA TGCCGTTATA TACTCAGAAG TTTAAAATAT TTGTCCTGTC ATCTTCCAAC
AATCCAGCAG ACATAACTAA GACAAAGGAT TTTGATGTAG AAGGCTACAT TGTAAAACCA
CTAAGTCAGG AAAAAATAAG CATGCTTTTA GAAGATGTAG CTTAA
 
Protein sequence
MRKFKSILLI DDDETSNFIS EVIIKKLGIT ETISTVKNGV EALNFVSNNC TINCAPTCPQ 
IIFLDLHMPV MDGFDFLKEL KKQMPLYTQK FKIFVLSSSN NPADITKTKD FDVEGYIVKP
LSQEKISMLL EDVA