Gene CHU_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0100 
Symbol 
ID4185931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp118941 
End bp119453 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content36% 
IMG OID638070100 
Producthypothetical protein 
Protein accessionYP_676734 
Protein GI110636527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0062841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACAG ATACAATAAT AAATAAGGTT CAACAAAGCG GATTGATCAC AATTGATCTG 
GAAGATTATT TTGATTCCGG CGAAAAAGTG CTTTTTGATA TAAAAAATTA CTTGCATGAG
GGTATTATTT TAAAAGAAAA GGACTTTAGG GCCTTCTTAA AAGAACATAA TTGGGAGCAA
TATGCAGGGA AAAATGTAGC AATTACATGT TCCGTTGATG CAATTATCCC AACCTGGGCA
TATATGTTGG TTACAACAAA ACTGCAACCC TATGCAAATT TGATCGTATT CGGGACATTA
AAAGACCTCC ATGCAAAAAT ATTTTCACAG GCAATTACTA AAATAAATGC AGCCGATTAT
ACCCAGGCTA AGGTCGTAAT TAAGGGTTGT GGTAAGCTGG AAGTGCCTGT TTCTGCGTAT
GTTGAACTGA CGAATAAATT GCTTCCGGTA GTTTCAAGCA TTATGTATGG AGAACCCTGC
AGCACGGTTC CCGTATACAA GCAATTAAAA TAA
 
Protein sequence
MSTDTIINKV QQSGLITIDL EDYFDSGEKV LFDIKNYLHE GIILKEKDFR AFLKEHNWEQ 
YAGKNVAITC SVDAIIPTWA YMLVTTKLQP YANLIVFGTL KDLHAKIFSQ AITKINAADY
TQAKVVIKGC GKLEVPVSAY VELTNKLLPV VSSIMYGEPC STVPVYKQLK