Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0099 |
Symbol | |
ID | 4185930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 118249 |
End bp | 118926 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070099 |
Product | M22 family peptidase |
Protein accession | YP_676733 |
Protein GI | 110636526 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00192145 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACATA TATTAAGTAT AGATACAAGC ACATCCATTT GTTCTGTTGC TTTACATACA GACGGCAAAT TGATTGCACA CACCGAAACA TTTTTAGACC GCTCTCACTC CAGAAATATT TCACATATGA TAGACCATAT ATTGGCGATA TGTGAAATAA GTATGAATGA CTTAAGCGCA TATGCTGTTT CAGCCGGGCC GGGCTCTTAT ACAGGAATGC GTATTGGCAC ATCAACGGCA AAAGGTTTTT GTTTCGCCCT GGACAAACCG CTTATTTCAG TTTCCTCTTT ATATAGCCTT GCAGCCAAAT TAGAACACAA ACAACCTGGT ATATATTATG TACCTATGAT TGATGCCAGG CGTATGGAAG TATATACAAC AATATATGAT TCCGGATTGA ATGAAATTGC GGAGGAACAA GCATTAATTC TTACCGAAGA ATCTTTTCAG GAACAATTAA TAGATAAAAA AGTGTTGTTT GGTGGTGATG GAAGCCGCAA GTTTCAGGAA ATTTGCAGTC ATTCGAATGC ATTCTTTGCA AACGATGCAT ATCCATCAGC AGAATTTATG GGTAAAAAGG CTTTTGAAAA GTTTCAAAAT CAAACATTCG AAGATATTGC CTACTTTGAA CCCAATTATA TCAAAGAATT TCACACAAAC AGCAATGTGA AGTCATAA
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Protein sequence | MAHILSIDTS TSICSVALHT DGKLIAHTET FLDRSHSRNI SHMIDHILAI CEISMNDLSA YAVSAGPGSY TGMRIGTSTA KGFCFALDKP LISVSSLYSL AAKLEHKQPG IYYVPMIDAR RMEVYTTIYD SGLNEIAEEQ ALILTEESFQ EQLIDKKVLF GGDGSRKFQE ICSHSNAFFA NDAYPSAEFM GKKAFEKFQN QTFEDIAYFE PNYIKEFHTN SNVKS
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