Gene CHU_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0099 
Symbol 
ID4185930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp118249 
End bp118926 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID638070099 
ProductM22 family peptidase 
Protein accessionYP_676733 
Protein GI110636526 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00192145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACATA TATTAAGTAT AGATACAAGC ACATCCATTT GTTCTGTTGC TTTACATACA 
GACGGCAAAT TGATTGCACA CACCGAAACA TTTTTAGACC GCTCTCACTC CAGAAATATT
TCACATATGA TAGACCATAT ATTGGCGATA TGTGAAATAA GTATGAATGA CTTAAGCGCA
TATGCTGTTT CAGCCGGGCC GGGCTCTTAT ACAGGAATGC GTATTGGCAC ATCAACGGCA
AAAGGTTTTT GTTTCGCCCT GGACAAACCG CTTATTTCAG TTTCCTCTTT ATATAGCCTT
GCAGCCAAAT TAGAACACAA ACAACCTGGT ATATATTATG TACCTATGAT TGATGCCAGG
CGTATGGAAG TATATACAAC AATATATGAT TCCGGATTGA ATGAAATTGC GGAGGAACAA
GCATTAATTC TTACCGAAGA ATCTTTTCAG GAACAATTAA TAGATAAAAA AGTGTTGTTT
GGTGGTGATG GAAGCCGCAA GTTTCAGGAA ATTTGCAGTC ATTCGAATGC ATTCTTTGCA
AACGATGCAT ATCCATCAGC AGAATTTATG GGTAAAAAGG CTTTTGAAAA GTTTCAAAAT
CAAACATTCG AAGATATTGC CTACTTTGAA CCCAATTATA TCAAAGAATT TCACACAAAC
AGCAATGTGA AGTCATAA
 
Protein sequence
MAHILSIDTS TSICSVALHT DGKLIAHTET FLDRSHSRNI SHMIDHILAI CEISMNDLSA 
YAVSAGPGSY TGMRIGTSTA KGFCFALDKP LISVSSLYSL AAKLEHKQPG IYYVPMIDAR
RMEVYTTIYD SGLNEIAEEQ ALILTEESFQ EQLIDKKVLF GGDGSRKFQE ICSHSNAFFA
NDAYPSAEFM GKKAFEKFQN QTFEDIAYFE PNYIKEFHTN SNVKS