| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0098 |
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| Symbol | prc |
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| ID | 4186007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 116514 |
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| End bp | 118166 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070098 |
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| Product | C-terminal processing peptidase-3 |
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| Protein accession | YP_676732 |
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| Protein GI | 110636525 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00892877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATTA AGCGTTGGGG AGTTATTACA GCTGTTGCCA TAGGATCAGT TGCTTTGTTG
TCTGCATTTA AACAAACAGA TAAGTATTTT GAAATTGCCA AAAACATGGA GCTTTTTTCT
GCCGTGTATA AAGAGGTGAA TTTATTATAT GTTGACGAAG TTAATCCGTC ACAAACGATG
ACAACAGGTA TTGATGCAAT GTTGGAGTCA TTAGATCCGT ATACAAATTA TATCCCTGAA
GATAAAATTG AAGATTTTCG GACACAAATG ACGGGTCAAT ACGGTGGTAT AGGTGCTGTT
ATTGGTGAGC GTAAAGACAA AATAATCATC CTGATGCCGT ATGAAGGTTT CCCGGCACAA
AAAGCAGGTC TTCAGATTGG TGATGAAATT CTTAGTGTAG ATGGCATTGT GACGACAAGT
AAAAATTCAG GTGATGTAAG TAAATTATTA AGAGGACAGG CAGACACACC GCTTAAAATT
AAAGTAAAGC GTTTTAACAC ACCTGAACCG TTAGAGTTTA CGCTGGTAAG ACAGAAAATC
AAAATCAGCA ATGTGCCATA CTTCGGTATG GTGAATACAA ATACAGGTTA TATCAAACTT
TCTGACTTTA CACAAGCCGC TTCTATTGAA GTGAAAAAAG CATTGACTGA TTTGAAAGCT
AAAGGAGCTA CACAGATCAT TTTTGATTTA AGAGGAAACC CAGGTGGTTT GCTGAACGAA
GCCGTTAATA TATCGAATAT CTTTATTCCG AAAGATAAAT TAGTAGTAAG TACAAAAGGG
AAAGTTTCTG AATGGAATAC AAAATATATA ACAGAGCTTG TTCCAGACGA TTTGAATATT
CCAATTGCTG TATTAGTTAG CGGACGCAGT GCTTCAGCTT CTGAAATCGT TGCCGGAGTA
ATTCAGGATT ATGACAGAGG GGTAATTATC GGTCAGCGTT CGTATGGAAA AGGCCTTGTG
CAAACAACAC GTGAACTGCC ATATAATTCT CAGATCAAAG TTACAACCGC TAAATATTAT
ACACCAAGCG GACGTTGTAT TCAGGCAATT GATTACGCAC ACAGAGCTGC AGACGGTTCT
GTATCTAAAT TTGCAGATTC GCTGCATGTA GCGTTTAAAA CTACAAATGG AAGAACGGTA
TATGATGGCG GCGGTGTAAC TCCTGATATT ACTGTCGTTC AGGATTCTAT TTCTCCGATC
CTGGTTGCAT TGGTTTCCAA GAGTCTGTTG TTCGATTATG CAACCGAATA CCGTTCAAAA
CACGAAAGCA TTGGCGATGC CAGAACATTT AACCTGTCAG ATAGAGATTA TCAGGATTTT
GTTACCTGGT TAAAAGACAA AGATTACTCC TATACAACTA AAGTTGAAAA GACATTAGAT
GAAATGACAA AGCAGTCCAA GCAGGAGAAA TATTTTGATG CCATGAAAGA TCAGCTGGAT
CAAATGAAAA AAGTTATCGC AAAAGATAAA GAGAATGATC TGATTAAATT TCAAAGCCAG
ATTATGGAAT ATTTAGAAGA AGAAATTGCT TCCAGATACT ATCTGCAAAA AGGTATCATT
GAATCATCTT TCGATAGCGA CAAAGACATA CAGTCAGCGC TTGAAGTATT AAATAATAAG
ACGAAATACA ATTCGATCTT ATCCGGAAAA TAA
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| Protein sequence | MNIKRWGVIT AVAIGSVALL SAFKQTDKYF EIAKNMELFS AVYKEVNLLY VDEVNPSQTM
TTGIDAMLES LDPYTNYIPE DKIEDFRTQM TGQYGGIGAV IGERKDKIII LMPYEGFPAQ
KAGLQIGDEI LSVDGIVTTS KNSGDVSKLL RGQADTPLKI KVKRFNTPEP LEFTLVRQKI
KISNVPYFGM VNTNTGYIKL SDFTQAASIE VKKALTDLKA KGATQIIFDL RGNPGGLLNE
AVNISNIFIP KDKLVVSTKG KVSEWNTKYI TELVPDDLNI PIAVLVSGRS ASASEIVAGV
IQDYDRGVII GQRSYGKGLV QTTRELPYNS QIKVTTAKYY TPSGRCIQAI DYAHRAADGS
VSKFADSLHV AFKTTNGRTV YDGGGVTPDI TVVQDSISPI LVALVSKSLL FDYATEYRSK
HESIGDARTF NLSDRDYQDF VTWLKDKDYS YTTKVEKTLD EMTKQSKQEK YFDAMKDQLD
QMKKVIAKDK ENDLIKFQSQ IMEYLEEEIA SRYYLQKGII ESSFDSDKDI QSALEVLNNK
TKYNSILSGK
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