Gene CHU_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0085 
Symbol 
ID4185994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp100368 
End bp101240 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content41% 
IMG OID638070085 
Producthypothetical protein 
Protein accessionYP_676719 
Protein GI110636512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0579282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA TTTACTTTAT TATCACAACA GTATTCTATG GAACTATGTT GTTCTGTTCA 
TGCATGCAGG AAGATGCAAA TATACGCAAT CGACCTGTTG ACGAACCATC TTACTCAAAA
CAAACAAACA TTTTTGTTCG TTCTACCATT CTAGAACGCT TTCCATGCCC TCCGGGTTAC
TCAAGAAAAT CGAATACTGA AAAAACATTT GCAGCCTGGC TTGAAACCAT ACCACTGAAA
AAAGAAGGGG CGCCGGTACT GCTTTTTAAC GGAGAACTTA AAAGCAATCA GCGTATACAT
GCCGCGGTGC TGGATTTTGA CAGAGGCACA AGTGACCTGC AGCAATGTGC TGATGCAGTA
ATGCGTTTGC GGGCAGAATA TCTATATCAA AAACACGCCT ATGATTCCAT TGCGTTTACA
TTTACGAATG GCAGCAAAGC TTCTTATTCA AAATGGAGAG AAGGCTACCG CCCTGTGGTA
ATAGGTAATT CCGTTGCCTG GACAAAATCT AAAAGCAGAG ATACAAGCTA TGCGTGTTTT
CGCTCTTACC TGAATACAGT GTTTATGTAT TGCGGCACCT ATTCACTTTC AAAAGAACTG
AAACCTGTTG ATATTACTGA GATTGCAGAG GGCGATGTTT TTATTTACGG CGGTTTTCCC
GGCCATGCCA TGATTGTAAT GGATGTTGCC GTACATGAAA CATCCGGAAA GAAAATAATG
ATACTGACGC AAAGCTATAT GCCTGCGCAG GATATTCATA TTGTAAAAAA CCTTTCTGAT
ACTGAATTAA GTCCATGGTA TGAAATTCCT GAAAGCGGAG AACTTATTAC GCCTGAATGG
AGCTTTGCTG TGAAGGATTT GAAGCGGTTT TGA
 
Protein sequence
MTNIYFIITT VFYGTMLFCS CMQEDANIRN RPVDEPSYSK QTNIFVRSTI LERFPCPPGY 
SRKSNTEKTF AAWLETIPLK KEGAPVLLFN GELKSNQRIH AAVLDFDRGT SDLQQCADAV
MRLRAEYLYQ KHAYDSIAFT FTNGSKASYS KWREGYRPVV IGNSVAWTKS KSRDTSYACF
RSYLNTVFMY CGTYSLSKEL KPVDITEIAE GDVFIYGGFP GHAMIVMDVA VHETSGKKIM
ILTQSYMPAQ DIHIVKNLSD TELSPWYEIP ESGELITPEW SFAVKDLKRF