Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0085 |
Symbol | |
ID | 4185994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 100368 |
End bp | 101240 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070085 |
Product | hypothetical protein |
Protein accession | YP_676719 |
Protein GI | 110636512 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0579282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATA TTTACTTTAT TATCACAACA GTATTCTATG GAACTATGTT GTTCTGTTCA TGCATGCAGG AAGATGCAAA TATACGCAAT CGACCTGTTG ACGAACCATC TTACTCAAAA CAAACAAACA TTTTTGTTCG TTCTACCATT CTAGAACGCT TTCCATGCCC TCCGGGTTAC TCAAGAAAAT CGAATACTGA AAAAACATTT GCAGCCTGGC TTGAAACCAT ACCACTGAAA AAAGAAGGGG CGCCGGTACT GCTTTTTAAC GGAGAACTTA AAAGCAATCA GCGTATACAT GCCGCGGTGC TGGATTTTGA CAGAGGCACA AGTGACCTGC AGCAATGTGC TGATGCAGTA ATGCGTTTGC GGGCAGAATA TCTATATCAA AAACACGCCT ATGATTCCAT TGCGTTTACA TTTACGAATG GCAGCAAAGC TTCTTATTCA AAATGGAGAG AAGGCTACCG CCCTGTGGTA ATAGGTAATT CCGTTGCCTG GACAAAATCT AAAAGCAGAG ATACAAGCTA TGCGTGTTTT CGCTCTTACC TGAATACAGT GTTTATGTAT TGCGGCACCT ATTCACTTTC AAAAGAACTG AAACCTGTTG ATATTACTGA GATTGCAGAG GGCGATGTTT TTATTTACGG CGGTTTTCCC GGCCATGCCA TGATTGTAAT GGATGTTGCC GTACATGAAA CATCCGGAAA GAAAATAATG ATACTGACGC AAAGCTATAT GCCTGCGCAG GATATTCATA TTGTAAAAAA CCTTTCTGAT ACTGAATTAA GTCCATGGTA TGAAATTCCT GAAAGCGGAG AACTTATTAC GCCTGAATGG AGCTTTGCTG TGAAGGATTT GAAGCGGTTT TGA
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Protein sequence | MTNIYFIITT VFYGTMLFCS CMQEDANIRN RPVDEPSYSK QTNIFVRSTI LERFPCPPGY SRKSNTEKTF AAWLETIPLK KEGAPVLLFN GELKSNQRIH AAVLDFDRGT SDLQQCADAV MRLRAEYLYQ KHAYDSIAFT FTNGSKASYS KWREGYRPVV IGNSVAWTKS KSRDTSYACF RSYLNTVFMY CGTYSLSKEL KPVDITEIAE GDVFIYGGFP GHAMIVMDVA VHETSGKKIM ILTQSYMPAQ DIHIVKNLSD TELSPWYEIP ESGELITPEW SFAVKDLKRF
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