| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0084 |
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| Symbol | pyrB |
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| ID | 4185993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 99439 |
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| End bp | 100362 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070084 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_676718 |
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| Protein GI | 110636511 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0579282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAAT TATCCGTAAA GCATTTATTA GGAATAAAAG ATCTTACAAC AAAAGATATT
GAGCTTATAT TAGAAACTGC CGGTCAATTT AAAGAGGTCA TCAACAGACC TATCAAAAAA
GTACCTTCCC TGCGTGATGT AACCATTGCC AATGTTTTTT TCGAAAACTC AACACGTACA
CGTTTATCGT TTGAATTAGC ACAAAAAAGA TTGTCTGCCG ACACCATTAA TTTTTCAGCG
GCAGCAAGTT CTGTAAAAAA AGGAGAAACA CTTTTAGATA CCGTAAATAA TATTCTGGCA
ATGAAAGTGG ATATGATTGT GATGCGCCAT GCAAGTGTAG GTGCGCCGCA TTTCTTAGCC
AAACACATCA GTGCAAATAT TGTAAATGCC GGAGATGGAA CACATGAGCA TCCGACACAA
GCATTATTAG ACAGCTTTTC CATTAAAGAA AAATTAGGCG GCGTAGCAGG GAAGAAGGTT
TGTATTTTCG GAGACATCCT GCATTCACGT GTAGCCTTAT CAAATATTTT TGCCTTGCAG
AAGCAGGGCG CTGAAGTGAT GGTTTGCGGC CCGTCAACAT TGATTCCGAA GTTTATCGGA
GAGTTAGGCG TTAAGGTAGA ATTTGATCTG CGCAAAGCCC TTCAATGGTG CGATGTAGCA
AATGTGTTGC GGATACAGCT TGAACGTCAG ACAATCAAAT ATTTTCCTAC ACTGAGAGAA
TACGCACAGT ATTACGGCAT CAACAAACAA TTGCTGGATT CATTGAACAA GGAAATTGTG
ATCATGCACC CGGGTCCGAT CAACAGAGGA GTTGAATTAA GCAGCGATGT AGCCGACAGC
GGTCATTCCA TTATTTTAGA TCAGGTAGAA AACGGTGTGG CAGTACGCAT GGCTGTATTG
TACCTGCTTG CCGGCAATAA GTAA
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| Protein sequence | MSQLSVKHLL GIKDLTTKDI ELILETAGQF KEVINRPIKK VPSLRDVTIA NVFFENSTRT
RLSFELAQKR LSADTINFSA AASSVKKGET LLDTVNNILA MKVDMIVMRH ASVGAPHFLA
KHISANIVNA GDGTHEHPTQ ALLDSFSIKE KLGGVAGKKV CIFGDILHSR VALSNIFALQ
KQGAEVMVCG PSTLIPKFIG ELGVKVEFDL RKALQWCDVA NVLRIQLERQ TIKYFPTLRE
YAQYYGINKQ LLDSLNKEIV IMHPGPINRG VELSSDVADS GHSIILDQVE NGVAVRMAVL
YLLAGNK
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