Gene CHU_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0082 
Symbol 
ID4185991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp98415 
End bp98822 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content37% 
IMG OID638070082 
Producthypothetical protein 
Protein accessionYP_676716 
Protein GI110636509 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0544653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACT GGCTTATCAA ATCTGAACCG TTTAAATATT CATTTGACCA ATTTGTTGCA 
GATAAAAAAA CATTCTGGGA TGGCGTGCGC AACTATCAGG CACGAAATAA CCTGCGTGAA
ATGAAGAAGG GTGACTTATT ACTTTTTTAT CATTCAAACG AGGGAAAAGA AATTGTTGGT
ATTGCTAAAA TTGTAAAAGA GGCGTATCAG GATCCAACAA CAGATGATGC AAACTGGGTT
GTTGTTGATG TTGCGCCGGT AAAAAAATTA AAAAATCCGG TAACACTTGA AATGGTTAAA
AAAGACAAAC GGTTAGCAAA CATGGCTTTG GTTAAACTCA TGCGTTTATC TGTACAACCG
GTTCGGAAAG AGGAGTTTGA TATTGTGCTT GAATTGGCCG GTGAATAA
 
Protein sequence
MNYWLIKSEP FKYSFDQFVA DKKTFWDGVR NYQARNNLRE MKKGDLLLFY HSNEGKEIVG 
IAKIVKEAYQ DPTTDDANWV VVDVAPVKKL KNPVTLEMVK KDKRLANMAL VKLMRLSVQP
VRKEEFDIVL ELAGE