| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0077 |
|---|
| Symbol | |
|---|
| ID | 4186396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 92010 |
|---|
| End bp | 93485 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638070077 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_676711 |
|---|
| Protein GI | 110636504 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.157435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACAT CTTTTATTTC GGAAACTAAA AACCGTTATT TTGTTTTAAG TTTATTCTGC
TGCACGTTGT TCATTTTAGT CCAATGGGCA ATCTTGCCAG CATCATACAC CTCAGATACA
GCAGATGGTG TATGGCATTA TTTACTAGCA CGTTATTCCT ACTGGAATCC GGCGTTCGAA
CTGGACCTCT GGGCTAAACC CGTCTTTACC ATACTTGCAG CACCATTTGC ACAGTTTGGT
TTAAAGGGAA TTCATTTCAT GCAGATTATC TGTTCCTTTC TAACAAGCAT TATACTTTTA
AAAATAGCCG ATTTTTTTAA TATAAAGCAT TTGTGGCTCA TTCCGATTTT ATTATTATTC
ACACCTGTAT ATTTTCCGGA GCTTTTCAGC GGACTTACAG AAATTGTCTT TGCTTTTTTT
CTTGTATGGG GCATCTACCT TGTTGTTATC AATGAATGGC TACTTGCCAC TGTTTTATTT
TCCTTCCTTC CATTTGTAAG ACAGGAAGGT TATTTTATTT TCCCATTGAT GGGCCTGCTG
CTGCTGATTC AGAAAAAATA TTTCTATATA CCGGCACTAT TAACTGGTTA TATGTTAGTA
ACCATTTATG GTTACTCTAC GCATCATTCT TTGATGTGGA TTTCCGACAA CAACCCATAT
AAAGGAGCGC AGGATATTTA CGGAAAAGGC GACTTCTTTT TTTATATCAA TGCACTGGAT
GAATTACTGG GTACGAGCCG CAAAGTGCTT TTGTACACAG GAGGAATCAT TTCTCTGTAC
ACGCTGATCC ATGGCCTGTT TACATTTAAA AAGAATACTA TTACAGAGAA TAAATTATTT
CATTTCCATT TTCTGACCCT TGGGTTTATT GTACTGTTCA TCACAGCAGA ATCCATATTC
TGGGCATTTG GTCTTTTTGG TGCATTGGGT ATGCATAGAC TTATAACCTG CATTGTACCA
TTGGTTGTAC TGATTATTAT TTTTGGCCTT GATGTGATTT ATACGTTTGC TTCTAAATAT
GGCTTCAGCA AAATATATAT TCTTACTCTT TCTATATTCA GTATATTTTT TGTGAATATA
ATTTTCAAGA TGCACTACTG GCCAATGGAA TTGAAAGATG AAACCGTTGT TGTAGCTGAT
GCCTGCGCGT GGTACAAGAC AAACAGCCCT GACAAAAAAG GCAAGGTATA TTTTAGTCAT
CCGTATACAA TTATCGGGTT AGATCTAAAC CCATATGATT CTAAAAAAAG CCAGGAGACG
TATGCAATTT CAGATAAACA ACACCCGGAA AACAATATGC AGGAAGGCGA TGTTATTGTT
TGGGATGCGC ACTTTGGTGC TAACGAAGGC AAATTACCTT TAACATCCTT TACACAAAAC
CCTAACTTTA TACTTCTTAA TCAGTTTTCA CCGGAAAATG CTTTCAATGT TTTAGGCGAT
CAGCCTTTTG GTGTATATAT ATTTAAAAGA AAATAA
|
|---|
| Protein sequence | MFTSFISETK NRYFVLSLFC CTLFILVQWA ILPASYTSDT ADGVWHYLLA RYSYWNPAFE
LDLWAKPVFT ILAAPFAQFG LKGIHFMQII CSFLTSIILL KIADFFNIKH LWLIPILLLF
TPVYFPELFS GLTEIVFAFF LVWGIYLVVI NEWLLATVLF SFLPFVRQEG YFIFPLMGLL
LLIQKKYFYI PALLTGYMLV TIYGYSTHHS LMWISDNNPY KGAQDIYGKG DFFFYINALD
ELLGTSRKVL LYTGGIISLY TLIHGLFTFK KNTITENKLF HFHFLTLGFI VLFITAESIF
WAFGLFGALG MHRLITCIVP LVVLIIIFGL DVIYTFASKY GFSKIYILTL SIFSIFFVNI
IFKMHYWPME LKDETVVVAD ACAWYKTNSP DKKGKVYFSH PYTIIGLDLN PYDSKKSQET
YAISDKQHPE NNMQEGDVIV WDAHFGANEG KLPLTSFTQN PNFILLNQFS PENAFNVLGD
QPFGVYIFKR K
|
|---|
| |