Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0067 |
Symbol | frvX |
ID | 4186386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 80866 |
End bp | 81774 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638070067 |
Product | aminopeptidase |
Protein accession | YP_676701 |
Protein GI | 110636494 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1363] Cellulase M and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.066634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTTT TAAAAGAACT ATGCTCCATA CATGCTCCTT CAGGAAATGA AGAGCCGCTT AAGGATTTTA TTCTTGAATA TATACGGAGT AATGCAGGAT CATGGTCATA TCAACCGGTA ATATATGCGG ATAATGATCT GCAGGATTGT ATCGTACTTG TTTTTGGCAA CCCCCGAACA GCTGTATTTG CGCATATGGA TTCAATTGGT TTTACTGTTT CGTATAACAA CCACCTGCAC CCGATTGGTT CGCCTTCAGC AAAAGAAGGC TACCGGTTAG TAGGTAAAGA TTCTAATGGA GACATAGAAG GCGTGTTGAA AATTGTTGAT GAGGAATGGA TGCTTGAAAC AGATCGCCTT ATTGATCGTG GAACGGAAGT AACATTCAAA CCAGACTTCA GAGAAGAAGG TGACTTTATT TTAACACCCT ATCTGGACGA CCGCCTTGGT GTATGGACGG CATTGGAACT GGCCAAAACG CTGGAGCACG GGATCATTGC TTTTACGTGC TGGGAAGAAC ACGGCGGCGG TTCTGTTGCA TACCTTGCGC GCTGGATCTA TGAAACCTTT CATGTGAAAC AATCGCTGAT CTGTGACATT ACCTGGGTAA CAGAAGGCGT GGAAGCAGGA AAAGGTGTTG CAATCTCCAT GCGCGACCGG ATGATTCCGC GTAAAAAATA TGTAAACCGT ATTATTGAAC TGGCCAGACA AACGGATATT CCGTTTCAAC TGGAGGTAGA AGGTGCCGGC GCCAGTGACG GACGTGAACT GCAGCTTTCT CCTTATCCAT GGGACTGGTG TTTTATCGGC GCGCCCGAAA AAGATGCCCA TACGCCGAAT GAATGCGTAC ATAAAAAGGA TATTGAATCG ATGGTAGGGT TATATAAGTA TTTGATGGAA AAGTTATAA
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Protein sequence | MQLLKELCSI HAPSGNEEPL KDFILEYIRS NAGSWSYQPV IYADNDLQDC IVLVFGNPRT AVFAHMDSIG FTVSYNNHLH PIGSPSAKEG YRLVGKDSNG DIEGVLKIVD EEWMLETDRL IDRGTEVTFK PDFREEGDFI LTPYLDDRLG VWTALELAKT LEHGIIAFTC WEEHGGGSVA YLARWIYETF HVKQSLICDI TWVTEGVEAG KGVAISMRDR MIPRKKYVNR IIELARQTDI PFQLEVEGAG ASDGRELQLS PYPWDWCFIG APEKDAHTPN ECVHKKDIES MVGLYKYLME KL
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