Gene CHU_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0067 
SymbolfrvX 
ID4186386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp80866 
End bp81774 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content44% 
IMG OID638070067 
Productaminopeptidase 
Protein accessionYP_676701 
Protein GI110636494 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1363] Cellulase M and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.066634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTT TAAAAGAACT ATGCTCCATA CATGCTCCTT CAGGAAATGA AGAGCCGCTT 
AAGGATTTTA TTCTTGAATA TATACGGAGT AATGCAGGAT CATGGTCATA TCAACCGGTA
ATATATGCGG ATAATGATCT GCAGGATTGT ATCGTACTTG TTTTTGGCAA CCCCCGAACA
GCTGTATTTG CGCATATGGA TTCAATTGGT TTTACTGTTT CGTATAACAA CCACCTGCAC
CCGATTGGTT CGCCTTCAGC AAAAGAAGGC TACCGGTTAG TAGGTAAAGA TTCTAATGGA
GACATAGAAG GCGTGTTGAA AATTGTTGAT GAGGAATGGA TGCTTGAAAC AGATCGCCTT
ATTGATCGTG GAACGGAAGT AACATTCAAA CCAGACTTCA GAGAAGAAGG TGACTTTATT
TTAACACCCT ATCTGGACGA CCGCCTTGGT GTATGGACGG CATTGGAACT GGCCAAAACG
CTGGAGCACG GGATCATTGC TTTTACGTGC TGGGAAGAAC ACGGCGGCGG TTCTGTTGCA
TACCTTGCGC GCTGGATCTA TGAAACCTTT CATGTGAAAC AATCGCTGAT CTGTGACATT
ACCTGGGTAA CAGAAGGCGT GGAAGCAGGA AAAGGTGTTG CAATCTCCAT GCGCGACCGG
ATGATTCCGC GTAAAAAATA TGTAAACCGT ATTATTGAAC TGGCCAGACA AACGGATATT
CCGTTTCAAC TGGAGGTAGA AGGTGCCGGC GCCAGTGACG GACGTGAACT GCAGCTTTCT
CCTTATCCAT GGGACTGGTG TTTTATCGGC GCGCCCGAAA AAGATGCCCA TACGCCGAAT
GAATGCGTAC ATAAAAAGGA TATTGAATCG ATGGTAGGGT TATATAAGTA TTTGATGGAA
AAGTTATAA
 
Protein sequence
MQLLKELCSI HAPSGNEEPL KDFILEYIRS NAGSWSYQPV IYADNDLQDC IVLVFGNPRT 
AVFAHMDSIG FTVSYNNHLH PIGSPSAKEG YRLVGKDSNG DIEGVLKIVD EEWMLETDRL
IDRGTEVTFK PDFREEGDFI LTPYLDDRLG VWTALELAKT LEHGIIAFTC WEEHGGGSVA
YLARWIYETF HVKQSLICDI TWVTEGVEAG KGVAISMRDR MIPRKKYVNR IIELARQTDI
PFQLEVEGAG ASDGRELQLS PYPWDWCFIG APEKDAHTPN ECVHKKDIES MVGLYKYLME
KL