Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0066 |
Symbol | |
ID | 4186385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 79446 |
End bp | 80783 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070066 |
Product | hypothetical protein |
Protein accession | YP_676700 |
Protein GI | 110636493 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.508238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0808592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA CACCGATAGT ATTTATATTA TTTCTTTTAA ACTTTATTTG CCTTGGTCAG GCAGATACAA CCATGCTGCT TTCAGACAAG GCTGTACAGA TAGAAGGAAC AGATGCTGTC AATGATTTAT ATAATTTCAA ATTTGAAAAA GCGGAAGGTT ATTTTTTATA TCTGAAAAGC CAGCACCCCA ATCACCCGAT GCCTTATTTC TTAATGGCAT TGAGTAACTG GTGGAAGATG ATGCCTTATA TTGACAACAA TGATTACACC AATGCCTACG AAAAAGAGTT TCTTTACTAC ATAGATCAGA CAATTGAAAA AGGCGAAGAG CAATTCAAAG CAGACGATCA AAATGTGGAA GCGGCCTTTT TCCTTTGTGC TGCGCATGGA TTTAAAGGAC GGTATTTTTC TGAAAATAAA GGATATGTAA AAGCTGCCTT TGCAGGCAAG AGTGCGCTGC ACTACTTAAC GTATACAAAA GGCAAAGGTG ATCTGAATCC CGAATTTCTA TTTGGCGAAT CTATTTTCAA TTATTATGCA GAATGGATAA AAGAAGAATA TCCATTACTA AAACCATTGG TTGGACTTTT TCCAAAAGGA GATAAGGCTG TAGGGCTGGC GCAATTAAAA GAATGTGCCA CTAACGCTTT TTATACGCGT ATAGAGGCAC AGTATTTTTT ATTGAGAATC TATACCAATG AAGAAAATAA TTCCAGAGCG GCGTATCCGT ATGCAAAATA CCTGTCAGAA AACTTTCCTG ACAATCCTTA TTTTCAACGG GTGTATGCAC GTCTATCCTT CGAGTTAGGA TATTATGCTC AGTGTGAAAA AATCTGCTAC GATATTAATT ATAAAGTAAA TATTGAAATG CCCGGCTATG AAGTAAATAC CGGAAGATAT GCGGCGTATT TTTTAGGCCG CATATTATAT GAAAAAAGTG ATCTGGAAAA ATCTAAATTT TATTTACTTA AAACCGCAGC CTTTGCAGAG TCCGGCAACA TGAATAAAAT GGGATATTCA TTATCTGCTT ATTATTATTT AGGGATGATT GAAGTTAAAT CGCAGAATTA TTCAGAAGCA GAAAAGTTCT TTTTGAAAGT AATTGATTTA GGTGAAGATA AGCAGGATAA CAGTGCGGTT TACAACTATT CGTATGCATC CTATCAATTG GCTTCTGTAT ATGAAAAACA GCAAAACACG AAGCGGGCTG AATCGTTTTA TAAGGATGCG ATAAAACGTG TTAAAAAACT AGACGAAAAA TCATACGCGT CTACAATCAA AGAAATTACA GCTAATTCTG AAGCAGGTCT GGAACGCCTT AAGCAGCCTA AGAAATAG
|
Protein sequence | MKKTPIVFIL FLLNFICLGQ ADTTMLLSDK AVQIEGTDAV NDLYNFKFEK AEGYFLYLKS QHPNHPMPYF LMALSNWWKM MPYIDNNDYT NAYEKEFLYY IDQTIEKGEE QFKADDQNVE AAFFLCAAHG FKGRYFSENK GYVKAAFAGK SALHYLTYTK GKGDLNPEFL FGESIFNYYA EWIKEEYPLL KPLVGLFPKG DKAVGLAQLK ECATNAFYTR IEAQYFLLRI YTNEENNSRA AYPYAKYLSE NFPDNPYFQR VYARLSFELG YYAQCEKICY DINYKVNIEM PGYEVNTGRY AAYFLGRILY EKSDLEKSKF YLLKTAAFAE SGNMNKMGYS LSAYYYLGMI EVKSQNYSEA EKFFLKVIDL GEDKQDNSAV YNYSYASYQL ASVYEKQQNT KRAESFYKDA IKRVKKLDEK SYASTIKEIT ANSEAGLERL KQPKK
|
| |