Gene CHU_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0063 
Symbol 
ID4186382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp76436 
End bp77521 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content38% 
IMG OID638070063 
Producta-glycosyltransferase 
Protein accessionYP_676697 
Protein GI110636490 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.15897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0344748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA AGCGCATCGT TGTAATCTGT CCGCATCCTG AAGGGGTTGC TCCCGGTCAG 
CGCTTGAAAT ACGAACAATA TTTTACGCAT TTCAGAAACA ACGGCATAGA AGTAGATGTG
AAACCGTTTA TGTCAGATCG GTTTTGGAAT ATCGTATATA AAAAAGGACA TATCCTTGAA
AAAATATTCT GGACACTGTA CGGATACTTA AAAAGAATAT GCCTGATTCC CCTTCTGCCG
TTTTATGATG GTGTATACAT ATTCCTGAAT GTTACACCCT TTGGAAAACC GCTTCTGGAA
AGGATGTATA TATGGATGAA TCCGAACATA ATTTATGATA TTGACGACCT GGTTTTTTTA
GGCAATACAA CAAAAGTGAA CAGATGGGTG TCACTATTAA AAAGGCCTGA AAAATACACA
TTTCTGATGC AGCGTGCGAA GCATGTAATT GTTTGTACAC CCTATCTGGA AGCGTTTGTA
AGGAAGTATA ACAACAATGT TGATGATATC TCTTCAACAA TAAATACAGA AGTGTATCTT
CCCGTAAATA CTTATACTAA TGAAAAAACC TTGACAATAG GTTGGTCGGG CAGCCACAGC
ACATTGAAAT ATTTTTTCCT GTTAAAAGAT ATATTAATCG AATTACGGGA AAAACACACA
TTCAACATTC TTGTTTTTGG TGTGCATACA TGCGAAGATA CCGGTTTGCA GATTGAGGTT
GTTCCGTTTA GTGAACAGGC AGAAGTTGCG ACACTGCAGC GCATTGATAT AGGTGTTTAT
CCGCTTCCGT TAGATGAGCA ATGGGTTTAT GGGAAAAGCG GATTGAAGGC ACTTCAATAT
ATGGCCTTGG GAATTCCAAC AATAGCTACA GGCATAGCCG CCAATTTAAG GGTTATTGAG
AATCGTAAAA CAGGGATGCT GGTTAAAACA AAAGAAGAAT GGCTAAACGG ACTTGAGACG
TTATTGACCG ATGCATCGTT AAGAAGAGAA CTTGGACTGG CTGCCAGAAA AAAAGTAGCT
GATACATTTT CTATCGAAGC CAATAAGGAT AAGTATCTAA AGATTGTAGT ATCAATTGTC
CGCTGA
 
Protein sequence
MKQKRIVVIC PHPEGVAPGQ RLKYEQYFTH FRNNGIEVDV KPFMSDRFWN IVYKKGHILE 
KIFWTLYGYL KRICLIPLLP FYDGVYIFLN VTPFGKPLLE RMYIWMNPNI IYDIDDLVFL
GNTTKVNRWV SLLKRPEKYT FLMQRAKHVI VCTPYLEAFV RKYNNNVDDI SSTINTEVYL
PVNTYTNEKT LTIGWSGSHS TLKYFFLLKD ILIELREKHT FNILVFGVHT CEDTGLQIEV
VPFSEQAEVA TLQRIDIGVY PLPLDEQWVY GKSGLKALQY MALGIPTIAT GIAANLRVIE
NRKTGMLVKT KEEWLNGLET LLTDASLRRE LGLAARKKVA DTFSIEANKD KYLKIVVSIV
R