Gene CHU_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0061 
Symbol 
ID4186380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp74308 
End bp75543 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content36% 
IMG OID638070061 
Productglycosyltransferase 
Protein accessionYP_676695 
Protein GI110636488 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.715924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0312794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA AGCACATACT TTATATCACA TATGATGGAC TTACAGATTT TTTAGGGCAG 
TCGCAGGTAT TGCCGTATAT TTTAGGCCTG GAAGAAAAAG GTTACCGATT CTCTATTTTA
AGTTTTGAGA AACCAGAAAA GATTGATTCC AACAAACACA TCATTCACGC ACTTATTGCC
AATAAAAACA TTCAGTGGTA TCCGCATACA TATCACAAAC GTTTTTCCAT CCTTGCCACC
CTTTGGGATC TGCACATAGG GCTTCGCTTC ATTTGCAAGC TTTATAAAAA AGATAGATTC
GACGGCGTTC ATTGCAGAAG TTACATTCCG GCAATCATGG GGCTGCTTTC CAAAAAGATT
TATCGTACAG GATTTATTTT TGATATGCGC GGCTTCTGGG CAGATGAACG GGTTGATGGA
GCATTATGGA ATCTGAAAAA TCCTGTCTTT TATCTGGTCT ATAAATTTTT TAAGTGGATT
GAAAAAAAAT GCCTGCTTCA TGCTGATTAT GTGGTTACGT TAACCAATAA TAGTTACGAA
GAAATGAAAA CCTGGAAGTT TGTTACCGGC AATATTAAGT TTAAAATAAT TCCTTGTTGT
GCCGATCTGA ATATTTTTTC CAGAGGGAAA TTAGTGCCCG ATGAAATAAA AAGATATGCG
GAGAAAATAC AGGCAGATGG AAAAACAGTC ATATCCTATT TAGGATCCAT CGGCACCTGG
TATATGATCG ATGAAATGAT CGAGTTTTAT CTGTTGTTTA AAGAGGAATT TAATCCTTCT
GTATTTTTAT TTATTACACC TGAAAAAGAA TCAGATATTC TTACGGTTGT TCAGCAATAC
GGCTTAACCA AAGAAGATAT TCGTGTTGTT CGGGCAGAAC GCAAAGAAGT ACCTTATTAT
TTAGCACTCA GCAATTATGC GTTGTTTTTC ATAAAGCCAA CCTACTCCAA AAAAAGCTCT
TCGCCTACAA AGCTTGCAGA GATCATGGCT ATGGGTGTTC CTGTAGTTTG TAATGGAAAC
GTTGGTGATG TAGAAACACA GGTTACTGAA AGTAAAGCCG GCATTGTATT AAAGACATTC
AATACAGATG ATTATAAAGA AACGAGCAAA CAGCTTAAAA CCAATTTGTC TGCATATTAT
AAAAAAGAGC ACGCATTAGA TTTTGTCGAA AATAATTTTT CTCTTAAAAA TGGCGTGCAG
TTATATTCTG AAATTTATTC CGAACTGTTT TCATGA
 
Protein sequence
MNKKHILYIT YDGLTDFLGQ SQVLPYILGL EEKGYRFSIL SFEKPEKIDS NKHIIHALIA 
NKNIQWYPHT YHKRFSILAT LWDLHIGLRF ICKLYKKDRF DGVHCRSYIP AIMGLLSKKI
YRTGFIFDMR GFWADERVDG ALWNLKNPVF YLVYKFFKWI EKKCLLHADY VVTLTNNSYE
EMKTWKFVTG NIKFKIIPCC ADLNIFSRGK LVPDEIKRYA EKIQADGKTV ISYLGSIGTW
YMIDEMIEFY LLFKEEFNPS VFLFITPEKE SDILTVVQQY GLTKEDIRVV RAERKEVPYY
LALSNYALFF IKPTYSKKSS SPTKLAEIMA MGVPVVCNGN VGDVETQVTE SKAGIVLKTF
NTDDYKETSK QLKTNLSAYY KKEHALDFVE NNFSLKNGVQ LYSEIYSELF S