| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0057 |
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| Symbol | nlpC |
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| ID | 4186978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 69681 |
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| End bp | 70205 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070057 |
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| Product | lipoprotein |
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| Protein accession | YP_676691 |
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| Protein GI | 110636484 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.438446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00939156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTTATT CCCGGTTAGC CATTCTGTTT CTTTTCGTTG GTTTGTTATT GAGCTGCAGA
AGTGCAAAAC AAAAACGTGC AAAAGAAAAT AACAAACAGC TTAAGACTGT TACAAAAGGA
AATAATCATG AAAGTACAGA AAAAGCCGAT AAAGTTATAA CGGAGGCACG CTCTTATATC
GGTACACCTT ATAAATTCGG AGGAACGAGC AGAGCAGGTA TGGATTGTTC GGGATTGATG
CTGCTCTGCT TTAAGGAGGT TAATATTCAA CTGCCGCGAA CTTCTGCCGA ACAAAGCAAT
GCAGGTACGG CCATTAAATA CAGCGACCTG AAGCCTGGGG ATATGGTTTT TTTTACCGAT
AAAAAAGGCG GATCCAAAGT TGTACATGCT GGCTTAGTCA GCATTGTAAA AGGACCGCGG
GATGTAAAGT TCATTCATTC CTCTACGAAA CTGGGGGTTG TCGAAAGCGA TCTGTATGTG
AGTTATTATG AAAGTATATT AATAAAAGCC AGACGTGTAT TATAA
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| Protein sequence | MRYSRLAILF LFVGLLLSCR SAKQKRAKEN NKQLKTVTKG NNHESTEKAD KVITEARSYI
GTPYKFGGTS RAGMDCSGLM LLCFKEVNIQ LPRTSAEQSN AGTAIKYSDL KPGDMVFFTD
KKGGSKVVHA GLVSIVKGPR DVKFIHSSTK LGVVESDLYV SYYESILIKA RRVL
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