| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0050 |
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| Symbol | pinQ |
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| ID | 4186971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 60525 |
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| End bp | 61148 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638070048 |
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| Product | DNA-invertase from lambdoid prophage Qin |
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| Protein accession | YP_676684 |
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| Protein GI | 110636477 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0112897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000566383 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGACAA AAGTAATATG TCTGGTTCGT GTGAGTACAC AAGACCAGGA TTACCAAAGA
CAGATTTCTG ATTTGACAAA ATACAGTCAG GCCAGAGATT TTGTAATTGT AGATTTTATC
TCTGAAAAAG TTTCAGGCAC AAAACGAAAT GAAGAACGAA ACGGGATTCA AGAACTTTTA
AAAAGGGCCA GAAAGAAAGA ATTTCAAAAA GTAATTGTTC AGGAGATTTC AAGGTTAGGA
AGAAATCCAT TTCAGGTTCA ACGTGTGATT GAAGAATTGG CAGAGCTTTC TATTTCAGTT
GTGGTTCAAA ACATGAACCT TGAGACTTTG GATGAAGGTG GAAATAGAAA CGGATTTATA
GATTTGATGC TAAGCACAGC AGTTCATTTT AGTTCAATTG AGAGAAGTTG GATTGTAAAT
CGAATTCGTT CAGGACAAAA GAACAGTAAG AAAAAAATTG GACGTCCATT CAATACATTT
GAGAGTAAGG AAGCTGTATT GAAAAAATAT GCAGCAGTTG TAAGAGATTT GAAAAGTGGA
ATCTCAATAA GAAAGGTGGC AAAGTTGAAT GATTTATCAA CTCCAACTAT TCAACGAGTA
AAAAAGCTGA TGCAGGAATT GTAG
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| Protein sequence | MKTKVICLVR VSTQDQDYQR QISDLTKYSQ ARDFVIVDFI SEKVSGTKRN EERNGIQELL
KRARKKEFQK VIVQEISRLG RNPFQVQRVI EELAELSISV VVQNMNLETL DEGGNRNGFI
DLMLSTAVHF SSIERSWIVN RIRSGQKNSK KKIGRPFNTF ESKEAVLKKY AAVVRDLKSG
ISIRKVAKLN DLSTPTIQRV KKLMQEL
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