Gene CHU_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0048 
Symbol 
ID4186969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp58075 
End bp58476 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content33% 
IMG OID638070046 
Producthypothetical protein 
Protein accessionYP_676682 
Protein GI110636475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000104657 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00227308 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTTA TCATTAAATT AATACTGATA GTAAGCTGCC TTGTAATTGC AAATGGATTT 
GTATGTAATA ACAAGCCAAC AGGTATGCTT GATTTGATAA AGACTAGGAT TGAACTCTAC
TACGATCAGG AAAGAAAAGA ATTGCAGATT AAGGTTGAAG GGAAAGAACA AATTGAATTA
GTACAGATTT ATGCAGGTGA AAAATTACTT GTGGAATTTG ACAATCAGCA AATCCCTCCT
TGGGATTCTA TTATTCGATT GAAGATGGGT TGTCCTTTAC CTTGTAAGTT TTGTTATATC
ATACAAACAA ATGATGGAAT GAGGCACAAT ATGAAAAGCA AGAAAACTGA TTTGAATGAA
AACGGGTCTT TCTGTGAGAT TGGATCCCCA AAAAAGAATT AA
 
Protein sequence
MKFIIKLILI VSCLVIANGF VCNNKPTGML DLIKTRIELY YDQERKELQI KVEGKEQIEL 
VQIYAGEKLL VEFDNQQIPP WDSIIRLKMG CPLPCKFCYI IQTNDGMRHN MKSKKTDLNE
NGSFCEIGSP KKN